Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC25.36■■□□□ 1.65
NINLQ9Y2I6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NINLQ9Y2I6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
NINLQ9Y2I6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC25.36■■□□□ 1.65
NINLQ9Y2I6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
NINLQ9Y2I6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NINLQ9Y2I6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NINLQ9Y2I6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC25.36■■□□□ 1.65
NINLQ9Y2I6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
NINLQ9Y2I6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC25.36■■□□□ 1.65
NINLQ9Y2I6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NINLQ9Y2I6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NINLQ9Y2I6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 KRT8P10-201ENST00000450021 1447 ntBASIC25.35■■□□□ 1.65
NINLQ9Y2I6 AC112777.1-201ENST00000540175 1423 ntBASIC25.35■■□□□ 1.65
NINLQ9Y2I6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC25.35■■□□□ 1.65
NINLQ9Y2I6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC25.34■■□□□ 1.65
NINLQ9Y2I6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 AC090616.6-201ENST00000582640 721 ntBASIC25.34■■□□□ 1.65
NINLQ9Y2I6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 AC009102.3-201ENST00000623118 1491 ntBASIC25.34■■□□□ 1.65
NINLQ9Y2I6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC25.34■■□□□ 1.65
NINLQ9Y2I6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NINLQ9Y2I6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NINLQ9Y2I6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC25.33■■□□□ 1.65
NINLQ9Y2I6 AC113404.2-201ENST00000507884 177 ntBASIC25.33■■□□□ 1.65
NINLQ9Y2I6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC25.33■■□□□ 1.65
NINLQ9Y2I6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC25.33■■□□□ 1.65
NINLQ9Y2I6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC25.33■■□□□ 1.65
NINLQ9Y2I6 RN7SL510P-201ENST00000581311 263 ntBASIC25.33■■□□□ 1.65
NINLQ9Y2I6 AC008687.5-201ENST00000593746 558 ntBASIC25.33■■□□□ 1.65
NINLQ9Y2I6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NINLQ9Y2I6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NINLQ9Y2I6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
NINLQ9Y2I6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
NINLQ9Y2I6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
NINLQ9Y2I6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC25.33■■□□□ 1.64
NINLQ9Y2I6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
NINLQ9Y2I6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
NINLQ9Y2I6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
NINLQ9Y2I6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 KRT17P6-201ENST00000453795 1220 ntBASIC25.32■■□□□ 1.64
NINLQ9Y2I6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 GXYLT1P4-201ENST00000613576 1192 ntBASIC25.32■■□□□ 1.64
NINLQ9Y2I6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC25.32■■□□□ 1.64
NINLQ9Y2I6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC25.31■■□□□ 1.64
NINLQ9Y2I6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NINLQ9Y2I6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms