Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.26■□□□□ 0.35
TMCC3Q9ULS5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMCC3Q9ULS5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
TMCC3Q9ULS5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMCC3Q9ULS5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TMCC3Q9ULS5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TMCC3Q9ULS5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.26■□□□□ 0.35
TMCC3Q9ULS5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMCC3Q9ULS5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMCC3Q9ULS5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
TMCC3Q9ULS5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMCC3Q9ULS5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMCC3Q9ULS5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMCC3Q9ULS5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMCC3Q9ULS5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMCC3Q9ULS5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 HLA-L-209ENST00000420110 1011 ntBASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 AC133041.1-202ENST00000642053 222 ntBASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 KRT8P41-201ENST00000533985 1514 ntBASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 AP000997.3-201ENST00000623333 2250 ntBASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMCC3Q9ULS5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 ID1-201ENST00000376105 1233 ntBASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 AL109923.1-201ENST00000618799 583 ntBASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 AC068587.9-201ENST00000641814 219 ntBASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMCC3Q9ULS5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms