Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GTF3C4Q9UKN8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GTF3C4Q9UKN8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GTF3C4Q9UKN8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
GTF3C4Q9UKN8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GTF3C4Q9UKN8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
GTF3C4Q9UKN8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 AC022616.7-201ENST00000525383 220 ntBASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 AL441883.1-201ENST00000566170 1045 ntBASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 AL031432.5-201ENST00000641059 760 ntBASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.99■□□□□ 0.79
GTF3C4Q9UKN8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GTF3C4Q9UKN8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 AC036111.1-201ENST00000533973 1582 ntBASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 MCCD1P1-208ENST00000445732 328 ntBASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
GTF3C4Q9UKN8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 NEK4P2-201ENST00000580004 1012 ntBASIC19.96■□□□□ 0.79
GTF3C4Q9UKN8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms