Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00474Q9P2X8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
LINC00474Q9P2X8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00474Q9P2X8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00474Q9P2X8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LINC00474Q9P2X8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00474Q9P2X8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00474Q9P2X8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00474Q9P2X8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00474Q9P2X8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 TSPY17P-201ENST00000450329 467 ntBASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
LINC00474Q9P2X8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 MESTP1-201ENST00000404287 994 ntBASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 RBM17P1-201ENST00000453646 1190 ntBASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 FITM1-202ENST00000559294 800 ntBASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 AC116562.4-202ENST00000641738 218 ntBASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 KRT8P3-201ENST00000519669 1449 ntBASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00474Q9P2X8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00474Q9P2X8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00474Q9P2X8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00474Q9P2X8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00474Q9P2X8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms