Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 AC126763.1-201ENST00000552015 2118 ntBASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 AC110285.5-201ENST00000611501 352 ntBASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 AL359736.2-201ENST00000621992 437 ntBASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCF3Q9NUQ8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 ZNF815P-204ENST00000434898 1737 ntBASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.87■□□□□ 0.61
ABCF3Q9NUQ8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms