Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.82■□□□□ 0.44
NECTIN3Q9NQS3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 SLC25A1P2-201ENST00000430693 912 ntBASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 ECEL1P2-202ENST00000465689 757 ntBASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 CA15P1-201ENST00000481698 905 ntBASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 AL023803.3-201ENST00000615559 522 ntBASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 FEM1AP3-201ENST00000403722 1741 ntBASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NECTIN3Q9NQS3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 KRT18P22-201ENST00000402024 1347 ntBASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.8■□□□□ 0.44
NECTIN3Q9NQS3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 CCR12P-201ENST00000446203 998 ntBASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 AC116562.4-202ENST00000641738 218 ntBASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 AC092338.2-201ENST00000568827 1415 ntBASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 FP475955.4-201ENST00000623131 1990 ntBASIC17.79■□□□□ 0.44
NECTIN3Q9NQS3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 AC090164.3-201ENST00000610780 2143 ntBASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NECTIN3Q9NQS3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms