Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.92■□□□□ 0.46
TUBB1Q9H4B7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBB1Q9H4B7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBB1Q9H4B7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TUBB1Q9H4B7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
TUBB1Q9H4B7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.92■□□□□ 0.46
TUBB1Q9H4B7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.92■□□□□ 0.46
TUBB1Q9H4B7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBB1Q9H4B7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBB1Q9H4B7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TUBB1Q9H4B7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TUBB1Q9H4B7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TUBB1Q9H4B7 REXO1L9P-201ENST00000604264 2108 ntBASIC17.92■□□□□ 0.46
TUBB1Q9H4B7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.92■□□□□ 0.46
TUBB1Q9H4B7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 AL359736.2-201ENST00000621992 437 ntBASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 AC138028.4-201ENST00000564984 1845 ntBASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBB1Q9H4B7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 AL023284.2-201ENST00000405850 579 ntBASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 GPAT2P1-201ENST00000444924 1672 ntBASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBB1Q9H4B7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.89■□□□□ 0.46
TUBB1Q9H4B7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
TUBB1Q9H4B7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TUBB1Q9H4B7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TUBB1Q9H4B7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TUBB1Q9H4B7 FSCN1P1-201ENST00000568912 1481 ntBASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 MIR564-202ENST00000385049 94 ntBASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 FAM197Y1-201ENST00000421178 764 ntBASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBB1Q9H4B7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms