Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 HCG4B-203ENST00000450128 991 ntBASIC17.63■□□□□ 0.41
SPTBN4Q9H254 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPTBN4Q9H254 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 AL132655.2-201ENST00000596276 594 ntBASIC17.62■□□□□ 0.41
SPTBN4Q9H254 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SPTBN4Q9H254 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 ATP5G2P4-201ENST00000442175 420 ntBASIC17.61■□□□□ 0.41
SPTBN4Q9H254 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 AC136632.2-201ENST00000512891 861 ntBASIC17.61■□□□□ 0.41
SPTBN4Q9H254 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 AC093520.2-201ENST00000561830 333 ntBASIC17.61■□□□□ 0.41
SPTBN4Q9H254 LINC00628-201ENST00000628516 1289 ntBASIC17.61■□□□□ 0.41
SPTBN4Q9H254 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPTBN4Q9H254 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 FAM207CP-201ENST00000443486 507 ntBASIC17.6■□□□□ 0.41
SPTBN4Q9H254 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 AL109659.2-201ENST00000606809 1674 ntBASIC17.6■□□□□ 0.41
SPTBN4Q9H254 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.6■□□□□ 0.41
SPTBN4Q9H254 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 AC027307.3-201ENST00000594262 1100 ntBASIC17.59■□□□□ 0.41
SPTBN4Q9H254 AC099343.3-201ENST00000605834 2503 ntBASIC17.59■□□□□ 0.41
SPTBN4Q9H254 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPTBN4Q9H254 AC112777.1-201ENST00000540175 1423 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms