Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 KRT8P3-201ENST00000519669 1449 ntBASIC19.38■□□□□ 0.69
DDX47Q9H0S4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 AC133041.1-202ENST00000642053 222 ntBASIC19.38■□□□□ 0.69
DDX47Q9H0S4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 UNC93B5-201ENST00000530315 699 ntBASIC19.37■□□□□ 0.69
DDX47Q9H0S4 AC008403.3-201ENST00000598924 454 ntBASIC19.37■□□□□ 0.69
DDX47Q9H0S4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 AC008556.1-201ENST00000610908 2040 ntBASIC19.37■□□□□ 0.69
DDX47Q9H0S4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX47Q9H0S4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX47Q9H0S4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms