Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 AC005521.1-201ENST00000393351 872 ntBASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 AC073508.3-201ENST00000619697 1419 ntBASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 AC126763.1-201ENST00000552015 2118 ntBASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR1EQ9GZS1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 AC020763.4-201ENST00000623414 4170 ntBASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 AC073592.3-201ENST00000625118 1834 ntBASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR1EQ9GZS1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 AC104390.1-201ENST00000555663 520 ntBASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1EQ9GZS1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms