Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 GPR32P1-201ENST00000601788 811 ntBASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.44■□□□□ 0.86
UBE2OQ9C0C9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 RPSAP43-201ENST00000402237 625 ntBASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 AC018712.1-201ENST00000455767 687 ntBASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 MIR3197-201ENST00000582241 73 ntBASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 AL591684.3-201ENST00000605187 298 ntBASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
UBE2OQ9C0C9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 POM121L3P-201ENST00000419331 1163 ntBASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 MIR3687-2-201ENST00000577708 61 ntBASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 AP005901.3-202ENST00000581653 237 ntBASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 AC008608.2-201ENST00000606089 416 ntBASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 AC027601.4-201ENST00000611259 610 ntBASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 MIR3687-1-201ENST00000614492 61 ntBASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.42■□□□□ 0.86
UBE2OQ9C0C9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 AL020996.1-203ENST00000536896 2307 ntBASIC20.41■□□□□ 0.86
UBE2OQ9C0C9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
UBE2OQ9C0C9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
UBE2OQ9C0C9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBE2OQ9C0C9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBE2OQ9C0C9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBE2OQ9C0C9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UBE2OQ9C0C9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms