Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 SMG8-203ENST00000578922 2178 ntBASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN3Q9BTN0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 INGX-202ENST00000489074 768 ntBASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 AC011467.2-201ENST00000598425 242 ntBASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 AC008556.1-201ENST00000610908 2040 ntBASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.47■□□□□ 0.55
LRFN3Q9BTN0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 AC244015.2-201ENST00000616358 1861 ntBASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 AC104417.2-201ENST00000562989 1793 ntBASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 AC002472.2-201ENST00000442739 958 ntBASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 AL390955.2-201ENST00000603032 514 ntBASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.46■□□□□ 0.55
LRFN3Q9BTN0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.54
LRFN3Q9BTN0 GPR89P-201ENST00000407924 1495 ntBASIC18.46■□□□□ 0.54
LRFN3Q9BTN0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRFN3Q9BTN0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.45■□□□□ 0.54
LRFN3Q9BTN0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.45■□□□□ 0.54
LRFN3Q9BTN0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRFN3Q9BTN0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
LRFN3Q9BTN0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
LRFN3Q9BTN0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRFN3Q9BTN0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRFN3Q9BTN0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRFN3Q9BTN0 AC093214.1-201ENST00000511688 1107 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms