Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LIMD2Q9BT23 TNRC18P3-201ENST00000441896 2691 ntBASIC11.08□□□□□ -0.64
LIMD2Q9BT23 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC11.08□□□□□ -0.64
LIMD2Q9BT23 AC104417.2-201ENST00000562989 1793 ntBASIC11.08□□□□□ -0.64
LIMD2Q9BT23 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LIMD2Q9BT23 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LIMD2Q9BT23 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LIMD2Q9BT23 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LIMD2Q9BT23 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
LIMD2Q9BT23 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LIMD2Q9BT23 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LIMD2Q9BT23 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
LIMD2Q9BT23 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC11.08□□□□□ -0.64
LIMD2Q9BT23 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
LIMD2Q9BT23 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 MMAB-206ENST00000540016 945 ntTSL 3 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 MTDHP1-201ENST00000605323 784 ntBASIC11.07□□□□□ -0.64
LIMD2Q9BT23 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC11.07□□□□□ -0.64
LIMD2Q9BT23 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 AP002982.1-201ENST00000492365 877 ntBASIC11.06□□□□□ -0.64
LIMD2Q9BT23 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 CD99P1-205ENST00000527459 561 ntBASIC11.06□□□□□ -0.64
LIMD2Q9BT23 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC11.06□□□□□ -0.64
LIMD2Q9BT23 AC008403.3-201ENST00000598924 454 ntBASIC11.06□□□□□ -0.64
LIMD2Q9BT23 AC110285.5-201ENST00000611501 352 ntBASIC11.06□□□□□ -0.64
LIMD2Q9BT23 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms