Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS2Q99743 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NPAS2Q99743 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS2Q99743 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NPAS2Q99743 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
NPAS2Q99743 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.19■□□□□ 0.5
NPAS2Q99743 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS2Q99743 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NPAS2Q99743 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
NPAS2Q99743 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.19■□□□□ 0.5
NPAS2Q99743 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.19■□□□□ 0.5
NPAS2Q99743 AC073592.3-201ENST00000625118 1834 ntBASIC18.19■□□□□ 0.5
NPAS2Q99743 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NPAS2Q99743 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.19■□□□□ 0.5
NPAS2Q99743 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS2Q99743 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
NPAS2Q99743 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NPAS2Q99743 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NPAS2Q99743 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS2Q99743 AL353807.1-201ENST00000427475 662 ntBASIC18.19■□□□□ 0.5
NPAS2Q99743 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS2Q99743 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.19■□□□□ 0.5
NPAS2Q99743 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.19■□□□□ 0.5
NPAS2Q99743 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.19■□□□□ 0.5
NPAS2Q99743 AC073195.1-201ENST00000607241 877 ntBASIC18.19■□□□□ 0.5
NPAS2Q99743 AL353708.3-201ENST00000610272 989 ntBASIC18.19■□□□□ 0.5
NPAS2Q99743 AC026471.5-201ENST00000615068 467 ntBASIC18.19■□□□□ 0.5
NPAS2Q99743 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS2Q99743 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS2Q99743 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS2Q99743 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS2Q99743 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS2Q99743 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS2Q99743 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS2Q99743 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS2Q99743 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NPAS2Q99743 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.19■□□□□ 0.5
NPAS2Q99743 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.19■□□□□ 0.5
NPAS2Q99743 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS2Q99743 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.19■□□□□ 0.5
NPAS2Q99743 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.18■□□□□ 0.5
NPAS2Q99743 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NPAS2Q99743 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
NPAS2Q99743 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.18■□□□□ 0.5
NPAS2Q99743 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NPAS2Q99743 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NPAS2Q99743 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.18■□□□□ 0.5
NPAS2Q99743 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.18■□□□□ 0.5
NPAS2Q99743 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.18■□□□□ 0.5
NPAS2Q99743 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.18■□□□□ 0.5
NPAS2Q99743 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NPAS2Q99743 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
NPAS2Q99743 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NPAS2Q99743 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.18■□□□□ 0.5
NPAS2Q99743 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NPAS2Q99743 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
NPAS2Q99743 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NPAS2Q99743 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS2Q99743 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS2Q99743 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.17■□□□□ 0.5
NPAS2Q99743 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.17■□□□□ 0.5
NPAS2Q99743 AC020916.1-201ENST00000587762 1774 ntBASIC18.17■□□□□ 0.5
NPAS2Q99743 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS2Q99743 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS2Q99743 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS2Q99743 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.17■□□□□ 0.5
NPAS2Q99743 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS2Q99743 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS2Q99743 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NPAS2Q99743 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS2Q99743 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.17■□□□□ 0.5
NPAS2Q99743 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.17■□□□□ 0.5
NPAS2Q99743 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS2Q99743 AP003071.4-201ENST00000562276 1284 ntBASIC18.17■□□□□ 0.5
NPAS2Q99743 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS2Q99743 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS2Q99743 REXO1L12P-201ENST00000622156 912 ntBASIC18.17■□□□□ 0.5
NPAS2Q99743 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.17■□□□□ 0.5
NPAS2Q99743 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms