Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB18PQ96TA0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 SLC25A1P2-201ENST00000430693 912 ntBASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 MIR4497-201ENST00000583208 89 ntBASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 AC034236.2-201ENST00000606662 1610 ntBASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB18PQ96TA0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.74
PCDHB18PQ96TA0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 CYP2D8P-201ENST00000433633 1490 ntBASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 AC093677.2-201ENST00000600169 1863 ntBASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHB18PQ96TA0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 AC007663.1-201ENST00000438948 1240 ntBASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 TSPY17P-201ENST00000450329 467 ntBASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 CR769767.2-201ENST00000622735 460 ntBASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 KRT17P2-201ENST00000300992 1314 ntBASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB18PQ96TA0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHB18PQ96TA0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB18PQ96TA0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB18PQ96TA0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB18PQ96TA0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB18PQ96TA0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB18PQ96TA0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB18PQ96TA0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB18PQ96TA0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB18PQ96TA0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms