Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CSPG4P5Q96PW8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSPG4P5Q96PW8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CSPG4P5Q96PW8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSPG4P5Q96PW8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSPG4P5Q96PW8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CSPG4P5Q96PW8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSPG4P5Q96PW8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 KRT18P23-201ENST00000435622 1283 ntBASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG4P5Q96PW8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 HMGA1P5-201ENST00000412453 271 ntBASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 AC145285.6-201ENST00000604632 637 ntBASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CSPG4P5Q96PW8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 KRT8P7-201ENST00000533003 1432 ntBASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 KRT18P22-201ENST00000402024 1347 ntBASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG4P5Q96PW8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CSPG4P5Q96PW8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG4P5Q96PW8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSPG4P5Q96PW8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
CSPG4P5Q96PW8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms