Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 AC139713.2-201ENST00000641328 2723 ntBASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NSMCE2Q96MF7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 AC060766.5-201ENST00000590539 871 ntBASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 PRORSD1P-202ENST00000563365 2154 ntBASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 KRT8P45-201ENST00000414328 1447 ntBASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NSMCE2Q96MF7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 KRT8P32-201ENST00000512863 1461 ntBASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 AC012313.1-201ENST00000593393 3059 ntBASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.53■□□□□ 0.4
NSMCE2Q96MF7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
NSMCE2Q96MF7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
NSMCE2Q96MF7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NSMCE2Q96MF7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NSMCE2Q96MF7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms