Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 AP000974.1-201ENST00000623909 2387 ntBASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 AL136038.4-201ENST00000603606 1261 ntBASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 AC079602.3-201ENST00000623931 403 ntBASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SMARCD1Q96GM5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 AL163051.1-201ENST00000569214 1512 ntBASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 FAM86EP-206ENST00000510506 987 ntBASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 AC018445.3-201ENST00000624177 1945 ntBASIC19.52■□□□□ 0.72
SMARCD1Q96GM5 MYLKP1-201ENST00000509077 1580 ntBASIC19.52■□□□□ 0.71
SMARCD1Q96GM5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SMARCD1Q96GM5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
SMARCD1Q96GM5 AL031598.1-201ENST00000561511 1773 ntBASIC19.52■□□□□ 0.71
SMARCD1Q96GM5 BX323043.1-201ENST00000641006 1765 ntBASIC19.52■□□□□ 0.71
SMARCD1Q96GM5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 HLA-F-220ENST00000434407 884 ntBASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 PVRIG2P-201ENST00000435460 978 ntBASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 VENTXP5-201ENST00000523979 775 ntBASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 AL136038.3-201ENST00000561909 1096 ntBASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 AL499627.1-201ENST00000569373 2188 ntBASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 AL391807.1-203ENST00000604392 2365 ntBASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.51■□□□□ 0.71
SMARCD1Q96GM5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 SPDYE13P-201ENST00000445314 798 ntBASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 AC091076.1-201ENST00000610741 619 ntBASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 AL358472.4-201ENST00000633140 710 ntBASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 CROCCP3-202ENST00000420820 1947 ntBASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms