Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIPA1Q96FS4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 AC004870.1-201ENST00000315132 882 ntBASIC18.61■□□□□ 0.57
SIPA1Q96FS4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 AC090616.6-201ENST00000582640 721 ntBASIC18.61■□□□□ 0.57
SIPA1Q96FS4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SIPA1Q96FS4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 AL032819.2-201ENST00000624543 2162 ntBASIC18.6■□□□□ 0.57
SIPA1Q96FS4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 AL845331.1-201ENST00000424978 1190 ntBASIC18.6■□□□□ 0.57
SIPA1Q96FS4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 TOB2P1-201ENST00000469761 992 ntBASIC18.6■□□□□ 0.57
SIPA1Q96FS4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 AL390719.2-201ENST00000606993 987 ntBASIC18.6■□□□□ 0.57
SIPA1Q96FS4 IGHV3-41-201ENST00000613121 348 ntBASIC18.6■□□□□ 0.57
SIPA1Q96FS4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIPA1Q96FS4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 UNC93B7-201ENST00000509439 705 ntBASIC18.59■□□□□ 0.57
SIPA1Q96FS4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 GPR32P1-201ENST00000601788 811 ntBASIC18.59■□□□□ 0.57
SIPA1Q96FS4 AC024563.2-201ENST00000603282 481 ntBASIC18.59■□□□□ 0.57
SIPA1Q96FS4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 Z98044.1-201ENST00000632503 1764 ntBASIC18.59■□□□□ 0.57
SIPA1Q96FS4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIPA1Q96FS4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIPA1Q96FS4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SIPA1Q96FS4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.58■□□□□ 0.57
SIPA1Q96FS4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.58■□□□□ 0.57
SIPA1Q96FS4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms