Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF31Q96EP0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF31Q96EP0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF31Q96EP0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF31Q96EP0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF31Q96EP0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF31Q96EP0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF31Q96EP0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF31Q96EP0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF31Q96EP0 HCG4P8-203ENST00000443049 980 ntBASIC17.91■□□□□ 0.46
RNF31Q96EP0 SPDYE13P-201ENST00000445314 798 ntBASIC17.91■□□□□ 0.46
RNF31Q96EP0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF31Q96EP0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF31Q96EP0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF31Q96EP0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
RNF31Q96EP0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF31Q96EP0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF31Q96EP0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RNF31Q96EP0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF31Q96EP0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF31Q96EP0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF31Q96EP0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF31Q96EP0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF31Q96EP0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF31Q96EP0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF31Q96EP0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RNF31Q96EP0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
RNF31Q96EP0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF31Q96EP0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF31Q96EP0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF31Q96EP0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF31Q96EP0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF31Q96EP0 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF31Q96EP0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF31Q96EP0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF31Q96EP0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF31Q96EP0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF31Q96EP0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF31Q96EP0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF31Q96EP0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF31Q96EP0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF31Q96EP0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RNF31Q96EP0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF31Q96EP0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF31Q96EP0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF31Q96EP0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RNF31Q96EP0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
RNF31Q96EP0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF31Q96EP0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF31Q96EP0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.89■□□□□ 0.45
RNF31Q96EP0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF31Q96EP0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF31Q96EP0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF31Q96EP0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF31Q96EP0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
RNF31Q96EP0 ZNF444P1-201ENST00000559497 298 ntBASIC17.89■□□□□ 0.45
RNF31Q96EP0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF31Q96EP0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF31Q96EP0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF31Q96EP0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF31Q96EP0 AC005082.1-201ENST00000413042 2259 ntBASIC17.89■□□□□ 0.45
RNF31Q96EP0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF31Q96EP0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RNF31Q96EP0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF31Q96EP0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF31Q96EP0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF31Q96EP0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF31Q96EP0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF31Q96EP0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
RNF31Q96EP0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNF31Q96EP0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RNF31Q96EP0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF31Q96EP0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF31Q96EP0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RNF31Q96EP0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF31Q96EP0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 TSPY21P-201ENST00000433481 731 ntBASIC17.88■□□□□ 0.45
RNF31Q96EP0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF31Q96EP0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF31Q96EP0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF31Q96EP0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNF31Q96EP0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF31Q96EP0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF31Q96EP0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF31Q96EP0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF31Q96EP0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF31Q96EP0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms