Protein–RNA interactions for Protein: Q96BQ5

CCDC127, Coiled-coil domain-containing protein 127, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC127Q96BQ5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 TERF1P1-201ENST00000311003 1181 ntBASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 AC005521.1-201ENST00000393351 872 ntBASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 AL512604.3-201ENST00000569583 964 ntBASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 AL138966.2-201ENST00000621997 464 ntBASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC127Q96BQ5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 KRT18P23-201ENST00000435622 1283 ntBASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 KRT18P57-201ENST00000443599 1254 ntBASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 AC141257.4-201ENST00000634557 245 ntBASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 AC136944.6-201ENST00000634818 245 ntBASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC127Q96BQ5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC127Q96BQ5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC127Q96BQ5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC127Q96BQ5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC127Q96BQ5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms