Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 AL357033.4-201ENST00000617703 1807 ntBASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 KRT18P3-201ENST00000451602 1288 ntBASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 AC092910.1-201ENST00000482027 1129 ntBASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TRIM43Q96BQ3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 AC004967.1-201ENST00000453589 447 ntBASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 RNA5SP415-201ENST00000517246 115 ntBASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 AC134684.3-201ENST00000641758 218 ntBASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM43Q96BQ3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 FEM1AP3-201ENST00000403722 1741 ntBASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 MIR3687-2-201ENST00000577708 61 ntBASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 Z83851.2-201ENST00000609564 659 ntBASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 MIR3687-1-201ENST00000614492 61 ntBASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 AC112777.1-201ENST00000540175 1423 ntBASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM43Q96BQ3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM43Q96BQ3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TRIM43Q96BQ3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM43Q96BQ3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM43Q96BQ3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TRIM43Q96BQ3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM43Q96BQ3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM43Q96BQ3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM43Q96BQ3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TRIM43Q96BQ3 INTS4P1-201ENST00000438455 1935 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms