Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 RNA5SP419-201ENST00000515908 135 ntBASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 AC099336.1-202ENST00000602961 463 ntBASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.21■□□□□ 0.99
U2AF1L4Q8WU68 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 KRT18P58-201ENST00000527480 1120 ntBASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
U2AF1L4Q8WU68 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 Z83836.1-201ENST00000624605 1642 ntBASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 SAPCD2P3-201ENST00000455031 850 ntBASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 MIR3917-201ENST00000580971 93 ntBASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 AC090616.6-201ENST00000582640 721 ntBASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
U2AF1L4Q8WU68 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 AC233702.3-201ENST00000578656 1387 ntBASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms