Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.67■□□□□ 0.26
CHD6Q8TD26 AC105339.1-204ENST00000636249 355 ntBASIC16.67■□□□□ 0.26
CHD6Q8TD26 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.67■□□□□ 0.26
CHD6Q8TD26 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.67■□□□□ 0.26
CHD6Q8TD26 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.67■□□□□ 0.26
CHD6Q8TD26 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD6Q8TD26 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD6Q8TD26 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD6Q8TD26 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD6Q8TD26 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD6Q8TD26 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.67■□□□□ 0.26
CHD6Q8TD26 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
CHD6Q8TD26 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHD6Q8TD26 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CHD6Q8TD26 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD6Q8TD26 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD6Q8TD26 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.66■□□□□ 0.26
CHD6Q8TD26 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD6Q8TD26 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD6Q8TD26 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CHD6Q8TD26 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD6Q8TD26 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHD6Q8TD26 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD6Q8TD26 CU639417.3-201ENST00000624240 1404 ntBASIC16.66■□□□□ 0.26
CHD6Q8TD26 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD6Q8TD26 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.66■□□□□ 0.26
CHD6Q8TD26 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.66■□□□□ 0.26
CHD6Q8TD26 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.66■□□□□ 0.26
CHD6Q8TD26 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD6Q8TD26 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.66■□□□□ 0.26
CHD6Q8TD26 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.66■□□□□ 0.26
CHD6Q8TD26 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD6Q8TD26 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD6Q8TD26 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.66■□□□□ 0.26
CHD6Q8TD26 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD6Q8TD26 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.66■□□□□ 0.26
CHD6Q8TD26 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.66■□□□□ 0.26
CHD6Q8TD26 AL353135.1-201ENST00000606729 504 ntBASIC16.66■□□□□ 0.26
CHD6Q8TD26 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.66■□□□□ 0.26
CHD6Q8TD26 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.66■□□□□ 0.26
CHD6Q8TD26 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD6Q8TD26 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD6Q8TD26 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.65■□□□□ 0.26
CHD6Q8TD26 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
CHD6Q8TD26 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD6Q8TD26 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.65■□□□□ 0.26
CHD6Q8TD26 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.65■□□□□ 0.26
CHD6Q8TD26 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD6Q8TD26 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.65■□□□□ 0.26
CHD6Q8TD26 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.65■□□□□ 0.26
CHD6Q8TD26 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD6Q8TD26 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.65■□□□□ 0.26
CHD6Q8TD26 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD6Q8TD26 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.65■□□□□ 0.26
CHD6Q8TD26 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD6Q8TD26 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.65■□□□□ 0.26
CHD6Q8TD26 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD6Q8TD26 AP001271.2-201ENST00000624018 1556 ntBASIC16.65■□□□□ 0.26
CHD6Q8TD26 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.65■□□□□ 0.26
CHD6Q8TD26 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD6Q8TD26 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD6Q8TD26 LINC01126-201ENST00000623515 1646 ntBASIC16.64■□□□□ 0.26
CHD6Q8TD26 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CHD6Q8TD26 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.64■□□□□ 0.26
CHD6Q8TD26 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHD6Q8TD26 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD6Q8TD26 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD6Q8TD26 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD6Q8TD26 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHD6Q8TD26 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD6Q8TD26 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.64■□□□□ 0.25
CHD6Q8TD26 AL033527.4-201ENST00000641026 673 ntBASIC16.64■□□□□ 0.25
CHD6Q8TD26 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.64■□□□□ 0.25
CHD6Q8TD26 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHD6Q8TD26 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.64■□□□□ 0.25
CHD6Q8TD26 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
CHD6Q8TD26 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD6Q8TD26 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHD6Q8TD26 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.64■□□□□ 0.25
CHD6Q8TD26 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.64■□□□□ 0.25
CHD6Q8TD26 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.64■□□□□ 0.25
CHD6Q8TD26 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.64■□□□□ 0.25
CHD6Q8TD26 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHD6Q8TD26 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD6Q8TD26 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD6Q8TD26 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHD6Q8TD26 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHD6Q8TD26 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.64■□□□□ 0.25
CHD6Q8TD26 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD6Q8TD26 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CHD6Q8TD26 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD6Q8TD26 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD6Q8TD26 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHD6Q8TD26 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD6Q8TD26 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CHD6Q8TD26 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD6Q8TD26 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHD6Q8TD26 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.63■□□□□ 0.25
CHD6Q8TD26 FAM8A2P-201ENST00000528813 1142 ntBASIC16.63■□□□□ 0.25
CHD6Q8TD26 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms