Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AL022342.1-201ENST00000400363 863 ntBASIC14.44□□□□□ -0.1
LINC01006Q8NI28 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 AC079776.4-201ENST00000511039 504 ntBASIC14.44□□□□□ -0.1
LINC01006Q8NI28 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 AC011840.4-201ENST00000578471 627 ntBASIC14.44□□□□□ -0.1
LINC01006Q8NI28 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 AL158211.5-201ENST00000623583 2518 ntBASIC14.44□□□□□ -0.1
LINC01006Q8NI28 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 HEIH-201ENST00000623091 1652 ntBASIC14.43□□□□□ -0.1
LINC01006Q8NI28 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 AP005901.3-202ENST00000581653 237 ntBASIC14.43□□□□□ -0.1
LINC01006Q8NI28 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC01006Q8NI28 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 MRPL3P1-201ENST00000400109 1033 ntBASIC14.42□□□□□ -0.1
LINC01006Q8NI28 NUS1P2-201ENST00000417358 873 ntBASIC14.42□□□□□ -0.1
LINC01006Q8NI28 SAPCD2P3-201ENST00000455031 850 ntBASIC14.42□□□□□ -0.1
LINC01006Q8NI28 MINOS1P3-201ENST00000457048 203 ntBASIC14.42□□□□□ -0.1
LINC01006Q8NI28 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01006Q8NI28 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01006Q8NI28 AKR1C7P-201ENST00000305623 895 ntBASIC14.41□□□□□ -0.1
LINC01006Q8NI28 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms