Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 MIR564-202ENST00000385049 94 ntBASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 GCSHP2-201ENST00000560971 527 ntBASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
PCDH20Q8N6Y1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 KRT8P7-201ENST00000533003 1432 ntBASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms