Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MIR718-201ENST00000390190 70 ntBASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 AP005242.2-201ENST00000580065 1175 ntBASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 ABALON-201ENST00000629058 1903 ntBASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CDKL3Q8IVW4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDKL3Q8IVW4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 AP000593.1-201ENST00000393668 712 ntBASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 AC008550.1-201ENST00000511500 884 ntBASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 AP003071.4-201ENST00000562276 1284 ntBASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 AC007613.1-201ENST00000572811 2597 ntBASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDKL3Q8IVW4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKL3Q8IVW4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.08■□□□□ 0.65
CDKL3Q8IVW4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKL3Q8IVW4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKL3Q8IVW4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKL3Q8IVW4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKL3Q8IVW4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKL3Q8IVW4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKL3Q8IVW4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDKL3Q8IVW4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.08■□□□□ 0.65
CDKL3Q8IVW4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms