Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 ZNF815P-204ENST00000434898 1737 ntBASIC15.62■□□□□ 0.09
CSMD2Q7Z408 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 AC011840.4-201ENST00000578471 627 ntBASIC15.62■□□□□ 0.09
CSMD2Q7Z408 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 AC007967.2-201ENST00000432613 625 ntBASIC15.62■□□□□ 0.09
CSMD2Q7Z408 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 MIR4469-201ENST00000583919 79 ntBASIC15.62■□□□□ 0.09
CSMD2Q7Z408 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD2Q7Z408 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 UNC93B6-202ENST00000528242 690 ntBASIC15.61■□□□□ 0.09
CSMD2Q7Z408 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 MTDHP5-201ENST00000598980 586 ntBASIC15.61■□□□□ 0.09
CSMD2Q7Z408 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD2Q7Z408 AC009237.14-201ENST00000609975 1594 ntBASIC15.61■□□□□ 0.09
CSMD2Q7Z408 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 RNA5SP415-201ENST00000517246 115 ntBASIC15.6■□□□□ 0.09
CSMD2Q7Z408 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 KRT8P7-201ENST00000533003 1432 ntBASIC15.6■□□□□ 0.09
CSMD2Q7Z408 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.6■□□□□ 0.09
CSMD2Q7Z408 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 KRT18P28-201ENST00000453838 1332 ntBASIC15.6■□□□□ 0.09
CSMD2Q7Z408 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 MTDHP3-201ENST00000594186 672 ntBASIC15.6■□□□□ 0.09
CSMD2Q7Z408 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD2Q7Z408 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms