Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RAPH1Q70E73 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RAPH1Q70E73 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAPH1Q70E73 AC068880.1-201ENST00000507289 2297 ntBASIC18.69■□□□□ 0.58
RAPH1Q70E73 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.69■□□□□ 0.58
RAPH1Q70E73 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RAPH1Q70E73 POU5F1P3-201ENST00000428824 1078 ntBASIC18.69■□□□□ 0.58
RAPH1Q70E73 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.69■□□□□ 0.58
RAPH1Q70E73 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.69■□□□□ 0.58
RAPH1Q70E73 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAPH1Q70E73 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAPH1Q70E73 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RAPH1Q70E73 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAPH1Q70E73 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RAPH1Q70E73 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAPH1Q70E73 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAPH1Q70E73 AC073592.3-201ENST00000625118 1834 ntBASIC18.69■□□□□ 0.58
RAPH1Q70E73 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAPH1Q70E73 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.69■□□□□ 0.58
RAPH1Q70E73 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAPH1Q70E73 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAPH1Q70E73 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAPH1Q70E73 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
RAPH1Q70E73 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.68■□□□□ 0.58
RAPH1Q70E73 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 AP002982.1-201ENST00000492365 877 ntBASIC18.68■□□□□ 0.58
RAPH1Q70E73 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.68■□□□□ 0.58
RAPH1Q70E73 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.68■□□□□ 0.58
RAPH1Q70E73 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.68■□□□□ 0.58
RAPH1Q70E73 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.68■□□□□ 0.58
RAPH1Q70E73 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.68■□□□□ 0.58
RAPH1Q70E73 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RAPH1Q70E73 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.68■□□□□ 0.58
RAPH1Q70E73 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RAPH1Q70E73 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RAPH1Q70E73 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.68■□□□□ 0.58
RAPH1Q70E73 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAPH1Q70E73 NOC2LP1-202ENST00000452600 2235 ntBASIC18.68■□□□□ 0.58
RAPH1Q70E73 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAPH1Q70E73 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAPH1Q70E73 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAPH1Q70E73 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAPH1Q70E73 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAPH1Q70E73 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAPH1Q70E73 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 NIFKP9-201ENST00000419265 221 ntBASIC18.67■□□□□ 0.58
RAPH1Q70E73 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAPH1Q70E73 AC133681.1-201ENST00000465482 601 ntBASIC18.67■□□□□ 0.58
RAPH1Q70E73 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 PRSS44-201ENST00000515154 1146 ntBASIC18.67■□□□□ 0.58
RAPH1Q70E73 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 RN7SL471P-201ENST00000580476 299 ntBASIC18.67■□□□□ 0.58
RAPH1Q70E73 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAPH1Q70E73 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAPH1Q70E73 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.67■□□□□ 0.58
RAPH1Q70E73 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms