Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CD109Q6YHK3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CD109Q6YHK3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CD109Q6YHK3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CD109Q6YHK3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CD109Q6YHK3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CD109Q6YHK3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CD109Q6YHK3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CD109Q6YHK3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CD109Q6YHK3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC28.17■■■□□ 2.1
CD109Q6YHK3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC28.16■■■□□ 2.1
CD109Q6YHK3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC28.16■■■□□ 2.1
CD109Q6YHK3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
CD109Q6YHK3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC28.16■■■□□ 2.1
CD109Q6YHK3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC28.16■■■□□ 2.1
CD109Q6YHK3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CD109Q6YHK3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CD109Q6YHK3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
CD109Q6YHK3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CD109Q6YHK3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC28.16■■■□□ 2.1
CD109Q6YHK3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC28.16■■■□□ 2.1
CD109Q6YHK3 AC068472.1-201ENST00000474589 881 ntBASIC28.16■■■□□ 2.1
CD109Q6YHK3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC28.16■■■□□ 2.1
CD109Q6YHK3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC28.16■■■□□ 2.1
CD109Q6YHK3 YBX1P5-201ENST00000509441 847 ntBASIC28.16■■■□□ 2.1
CD109Q6YHK3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CD109Q6YHK3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC28.16■■■□□ 2.1
CD109Q6YHK3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CD109Q6YHK3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CD109Q6YHK3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
CD109Q6YHK3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC28.16■■■□□ 2.1
CD109Q6YHK3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CD109Q6YHK3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CD109Q6YHK3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC28.15■■■□□ 2.1
CD109Q6YHK3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CD109Q6YHK3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CD109Q6YHK3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC28.15■■■□□ 2.1
CD109Q6YHK3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC28.15■■■□□ 2.1
CD109Q6YHK3 AL035633.1-201ENST00000406139 838 ntBASIC28.15■■■□□ 2.1
CD109Q6YHK3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CD109Q6YHK3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
CD109Q6YHK3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CD109Q6YHK3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC28.15■■■□□ 2.1
CD109Q6YHK3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC28.15■■■□□ 2.1
CD109Q6YHK3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC28.15■■■□□ 2.1
CD109Q6YHK3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CD109Q6YHK3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC28.15■■■□□ 2.1
CD109Q6YHK3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC28.14■■■□□ 2.1
CD109Q6YHK3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CD109Q6YHK3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CD109Q6YHK3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CD109Q6YHK3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CD109Q6YHK3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC28.14■■■□□ 2.1
CD109Q6YHK3 FAM8A3P-201ENST00000427218 844 ntBASIC28.14■■■□□ 2.1
CD109Q6YHK3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC28.14■■■□□ 2.1
CD109Q6YHK3 AC068587.9-201ENST00000641814 219 ntBASIC28.14■■■□□ 2.1
CD109Q6YHK3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
CD109Q6YHK3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC28.14■■■□□ 2.09
CD109Q6YHK3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.09
CD109Q6YHK3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.09
CD109Q6YHK3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC28.14■■■□□ 2.09
CD109Q6YHK3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CD109Q6YHK3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CD109Q6YHK3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC28.13■■■□□ 2.09
CD109Q6YHK3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CD109Q6YHK3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CD109Q6YHK3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CD109Q6YHK3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC28.13■■■□□ 2.09
CD109Q6YHK3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC28.13■■■□□ 2.09
CD109Q6YHK3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC28.13■■■□□ 2.09
CD109Q6YHK3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC28.13■■■□□ 2.09
CD109Q6YHK3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC28.13■■■□□ 2.09
CD109Q6YHK3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC28.13■■■□□ 2.09
CD109Q6YHK3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
CD109Q6YHK3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
CD109Q6YHK3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CD109Q6YHK3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
CD109Q6YHK3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CD109Q6YHK3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CD109Q6YHK3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC28.13■■■□□ 2.09
CD109Q6YHK3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC28.13■■■□□ 2.09
CD109Q6YHK3 AC099778.1-201ENST00000568593 1911 ntBASIC28.13■■■□□ 2.09
CD109Q6YHK3 Z98044.1-201ENST00000632503 1764 ntBASIC28.12■■■□□ 2.09
CD109Q6YHK3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CD109Q6YHK3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC28.12■■■□□ 2.09
CD109Q6YHK3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
CD109Q6YHK3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CD109Q6YHK3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC28.12■■■□□ 2.09
CD109Q6YHK3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC28.12■■■□□ 2.09
CD109Q6YHK3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CD109Q6YHK3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CD109Q6YHK3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC28.12■■■□□ 2.09
CD109Q6YHK3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CD109Q6YHK3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CD109Q6YHK3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
CD109Q6YHK3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC28.11■■■□□ 2.09
CD109Q6YHK3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CD109Q6YHK3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CD109Q6YHK3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
CD109Q6YHK3 PON3-203ENST00000427422 894 ntTSL 3 BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms