Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 AP005242.2-201ENST00000580065 1175 ntBASIC20.97■□□□□ 0.95
SHC4Q6S5L8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.96■□□□□ 0.95
SHC4Q6S5L8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 AL023803.3-201ENST00000615559 522 ntBASIC20.96■□□□□ 0.95
SHC4Q6S5L8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 PCDHB18P-201ENST00000524813 2368 ntBASIC20.96■□□□□ 0.95
SHC4Q6S5L8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 AC034236.2-201ENST00000606662 1610 ntBASIC20.96■□□□□ 0.95
SHC4Q6S5L8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.96■□□□□ 0.95
SHC4Q6S5L8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
SHC4Q6S5L8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.95
SHC4Q6S5L8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.95■□□□□ 0.95
SHC4Q6S5L8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 AC008764.6-201ENST00000595909 2069 ntBASIC20.95■□□□□ 0.94
SHC4Q6S5L8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 TSPY7P-201ENST00000431358 1114 ntBASIC20.95■□□□□ 0.94
SHC4Q6S5L8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 RBM17P1-201ENST00000453646 1190 ntBASIC20.95■□□□□ 0.94
SHC4Q6S5L8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC4Q6S5L8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 AC008550.1-201ENST00000511500 884 ntBASIC20.94■□□□□ 0.94
SHC4Q6S5L8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 MIR3180-5-201ENST00000583743 153 ntBASIC20.94■□□□□ 0.94
SHC4Q6S5L8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms