Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 MYC-208ENST00000641036 567 ntBASIC19.34■□□□□ 0.69
TRNP1Q6NT89 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRNP1Q6NT89 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRNP1Q6NT89 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.34■□□□□ 0.69
TRNP1Q6NT89 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.34■□□□□ 0.69
TRNP1Q6NT89 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRNP1Q6NT89 BICD1-207ENST00000551848 1962 ntBASIC19.33■□□□□ 0.69
TRNP1Q6NT89 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRNP1Q6NT89 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRNP1Q6NT89 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRNP1Q6NT89 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TRNP1Q6NT89 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TRNP1Q6NT89 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRNP1Q6NT89 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.33■□□□□ 0.69
TRNP1Q6NT89 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
TRNP1Q6NT89 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRNP1Q6NT89 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 KRT18P57-201ENST00000443599 1254 ntBASIC19.33■□□□□ 0.68
TRNP1Q6NT89 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 LINC01023-201ENST00000606054 436 ntBASIC19.33■□□□□ 0.68
TRNP1Q6NT89 AL023973.1-201ENST00000624619 620 ntBASIC19.33■□□□□ 0.68
TRNP1Q6NT89 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 AL163051.1-201ENST00000569214 1512 ntBASIC19.33■□□□□ 0.68
TRNP1Q6NT89 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.33■□□□□ 0.68
TRNP1Q6NT89 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 SDHAP2-201ENST00000455183 2001 ntBASIC19.32■□□□□ 0.68
TRNP1Q6NT89 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 NEK4P2-201ENST00000580004 1012 ntBASIC19.32■□□□□ 0.68
TRNP1Q6NT89 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 KRT8P7-201ENST00000533003 1432 ntBASIC19.32■□□□□ 0.68
TRNP1Q6NT89 ESPNP-201ENST00000270691 2015 ntBASIC19.32■□□□□ 0.68
TRNP1Q6NT89 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.32■□□□□ 0.68
TRNP1Q6NT89 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.31■□□□□ 0.68
TRNP1Q6NT89 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.31■□□□□ 0.68
TRNP1Q6NT89 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms