Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 KRT18P58-201ENST00000527480 1120 ntBASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 AC025062.2-201ENST00000605477 670 ntBASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 PMS2P2-201ENST00000425039 1128 ntBASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 MIR1233-2-201ENST00000408138 82 ntBASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 MIR1233-1-201ENST00000408722 82 ntBASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
VPS13DQ5THJ4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 AL158211.5-201ENST00000623583 2518 ntBASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 AP001160.2-201ENST00000596071 487 ntBASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 AC125634.1-201ENST00000438758 1403 ntBASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13DQ5THJ4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 AC022898.2-201ENST00000616822 1312 ntBASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 HEIH-201ENST00000623091 1652 ntBASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13DQ5THJ4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms