Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 DRAXINP1-201ENST00000437611 948 ntBASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 AL691432.3-201ENST00000621860 400 ntBASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RNFT1Q5M7Z0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
RNFT1Q5M7Z0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 LINC00265-3P-201ENST00000447588 903 ntBASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 RN7SL510P-201ENST00000581311 263 ntBASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNFT1Q5M7Z0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 IGHGP-201ENST00000390555 1178 ntBASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 TOB2P1-201ENST00000469761 992 ntBASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 AP000867.3-201ENST00000524675 377 ntBASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 AC099343.3-201ENST00000605834 2503 ntBASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNFT1Q5M7Z0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms