Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 AL353807.1-201ENST00000427475 662 ntBASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP6AP1LQ52LC2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 KRT8P45-201ENST00000414328 1447 ntBASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 RPS2P4-201ENST00000476944 856 ntBASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP6AP1LQ52LC2 PCDHB18P-201ENST00000524813 2368 ntBASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 AC073648.6-201ENST00000641589 218 ntBASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 RCC2P3-201ENST00000418112 1537 ntBASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 KRT16P1-201ENST00000399124 1418 ntBASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP6AP1LQ52LC2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 PKD1P1-201ENST00000458669 6805 ntBASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 AC026271.3-201ENST00000571884 352 ntBASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP6AP1LQ52LC2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms