Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC32.62■■■□□ 2.81
HMGXB3Q12766 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC32.62■■■□□ 2.81
HMGXB3Q12766 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC32.62■■■□□ 2.81
HMGXB3Q12766 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC32.62■■■□□ 2.81
HMGXB3Q12766 AC125634.1-201ENST00000438758 1403 ntBASIC32.62■■■□□ 2.81
HMGXB3Q12766 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC32.61■■■□□ 2.81
HMGXB3Q12766 AC009947.1-201ENST00000444350 727 ntBASIC32.61■■■□□ 2.81
HMGXB3Q12766 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
HMGXB3Q12766 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC32.61■■■□□ 2.81
HMGXB3Q12766 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC32.61■■■□□ 2.81
HMGXB3Q12766 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
HMGXB3Q12766 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
HMGXB3Q12766 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC32.61■■■□□ 2.81
HMGXB3Q12766 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
HMGXB3Q12766 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
HMGXB3Q12766 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
HMGXB3Q12766 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
HMGXB3Q12766 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
HMGXB3Q12766 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC32.61■■■□□ 2.81
HMGXB3Q12766 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC32.61■■■□□ 2.81
HMGXB3Q12766 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
HMGXB3Q12766 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
HMGXB3Q12766 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
HMGXB3Q12766 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
HMGXB3Q12766 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
HMGXB3Q12766 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
HMGXB3Q12766 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
HMGXB3Q12766 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC32.6■■■□□ 2.81
HMGXB3Q12766 LAGE3P1-201ENST00000425356 484 ntBASIC32.6■■■□□ 2.81
HMGXB3Q12766 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC32.6■■■□□ 2.81
HMGXB3Q12766 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC32.6■■■□□ 2.81
HMGXB3Q12766 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC32.6■■■□□ 2.81
HMGXB3Q12766 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC32.6■■■□□ 2.81
HMGXB3Q12766 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC32.6■■■□□ 2.81
HMGXB3Q12766 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC32.59■■■□□ 2.81
HMGXB3Q12766 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
HMGXB3Q12766 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
HMGXB3Q12766 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
HMGXB3Q12766 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
HMGXB3Q12766 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC32.59■■■□□ 2.81
HMGXB3Q12766 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
HMGXB3Q12766 CENPM-204ENST00000402420 688 ntTSL 5 BASIC32.59■■■□□ 2.81
HMGXB3Q12766 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC32.59■■■□□ 2.81
HMGXB3Q12766 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC32.59■■■□□ 2.81
HMGXB3Q12766 MTMR9LP-203ENST00000426597 1545 ntBASIC32.59■■■□□ 2.81
HMGXB3Q12766 UBQLN4P1-201ENST00000461599 1801 ntBASIC32.59■■■□□ 2.81
HMGXB3Q12766 FEM1AP3-201ENST00000403722 1741 ntBASIC32.59■■■□□ 2.81
HMGXB3Q12766 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
HMGXB3Q12766 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
HMGXB3Q12766 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
HMGXB3Q12766 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
HMGXB3Q12766 KRT18P27-201ENST00000427733 1299 ntBASIC32.58■■■□□ 2.81
HMGXB3Q12766 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC32.58■■■□□ 2.81
HMGXB3Q12766 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC32.58■■■□□ 2.81
HMGXB3Q12766 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC32.58■■■□□ 2.81
HMGXB3Q12766 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
HMGXB3Q12766 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
HMGXB3Q12766 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC32.58■■■□□ 2.81
HMGXB3Q12766 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC32.58■■■□□ 2.81
HMGXB3Q12766 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC32.58■■■□□ 2.81
HMGXB3Q12766 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC32.58■■■□□ 2.81
HMGXB3Q12766 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.81
HMGXB3Q12766 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC32.57■■■□□ 2.81
HMGXB3Q12766 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
HMGXB3Q12766 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
HMGXB3Q12766 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
HMGXB3Q12766 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
HMGXB3Q12766 AC105339.3-201ENST00000560043 636 ntBASIC32.57■■■□□ 2.8
HMGXB3Q12766 COX5A-204ENST00000567270 579 ntTSL 3 BASIC32.57■■■□□ 2.8
HMGXB3Q12766 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC32.57■■■□□ 2.8
HMGXB3Q12766 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
HMGXB3Q12766 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
HMGXB3Q12766 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
HMGXB3Q12766 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
HMGXB3Q12766 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
HMGXB3Q12766 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC32.57■■■□□ 2.8
HMGXB3Q12766 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
HMGXB3Q12766 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
HMGXB3Q12766 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC32.56■■■□□ 2.8
HMGXB3Q12766 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC32.56■■■□□ 2.8
HMGXB3Q12766 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
HMGXB3Q12766 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
HMGXB3Q12766 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
HMGXB3Q12766 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
HMGXB3Q12766 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
HMGXB3Q12766 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC32.56■■■□□ 2.8
HMGXB3Q12766 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
HMGXB3Q12766 BEX3-201ENST00000361298 921 ntTSL 2 BASIC32.56■■■□□ 2.8
HMGXB3Q12766 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC32.56■■■□□ 2.8
HMGXB3Q12766 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
HMGXB3Q12766 AC211486.1-202ENST00000416371 468 ntBASIC32.56■■■□□ 2.8
HMGXB3Q12766 AC068472.1-201ENST00000474589 881 ntBASIC32.56■■■□□ 2.8
HMGXB3Q12766 AC211476.1-201ENST00000503899 468 ntBASIC32.56■■■□□ 2.8
HMGXB3Q12766 RNF151-202ENST00000569210 853 ntTSL 2 BASIC32.56■■■□□ 2.8
HMGXB3Q12766 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
HMGXB3Q12766 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC32.55■■■□□ 2.8
HMGXB3Q12766 IRX1P1-201ENST00000438849 1838 ntBASIC32.55■■■□□ 2.8
HMGXB3Q12766 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
HMGXB3Q12766 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
HMGXB3Q12766 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms