Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA1Q09470 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
KCNA1Q09470 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNA1Q09470 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
KCNA1Q09470 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA1Q09470 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
KCNA1Q09470 KRT18P23-201ENST00000435622 1283 ntBASIC20.4■□□□□ 0.86
KCNA1Q09470 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
KCNA1Q09470 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
KCNA1Q09470 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
KCNA1Q09470 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA1Q09470 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.4■□□□□ 0.86
KCNA1Q09470 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
KCNA1Q09470 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNA1Q09470 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.4■□□□□ 0.86
KCNA1Q09470 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNA1Q09470 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNA1Q09470 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA1Q09470 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNA1Q09470 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA1Q09470 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
KCNA1Q09470 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.4■□□□□ 0.86
KCNA1Q09470 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA1Q09470 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA1Q09470 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.4■□□□□ 0.86
KCNA1Q09470 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.4■□□□□ 0.86
KCNA1Q09470 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA1Q09470 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KCNA1Q09470 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KCNA1Q09470 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
KCNA1Q09470 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
KCNA1Q09470 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KCNA1Q09470 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
KCNA1Q09470 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.39■□□□□ 0.86
KCNA1Q09470 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KCNA1Q09470 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.39■□□□□ 0.86
KCNA1Q09470 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KCNA1Q09470 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KCNA1Q09470 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
KCNA1Q09470 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.39■□□□□ 0.85
KCNA1Q09470 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.39■□□□□ 0.85
KCNA1Q09470 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
KCNA1Q09470 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
KCNA1Q09470 RCN1P1-201ENST00000400413 996 ntBASIC20.39■□□□□ 0.85
KCNA1Q09470 AL137013.1-201ENST00000432946 1228 ntBASIC20.39■□□□□ 0.85
KCNA1Q09470 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.39■□□□□ 0.85
KCNA1Q09470 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.39■□□□□ 0.85
KCNA1Q09470 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.39■□□□□ 0.85
KCNA1Q09470 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.39■□□□□ 0.85
KCNA1Q09470 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.39■□□□□ 0.85
KCNA1Q09470 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.39■□□□□ 0.85
KCNA1Q09470 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.39■□□□□ 0.85
KCNA1Q09470 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
KCNA1Q09470 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.39■□□□□ 0.85
KCNA1Q09470 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA1Q09470 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA1Q09470 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNA1Q09470 MYLKP1-201ENST00000509077 1580 ntBASIC20.38■□□□□ 0.85
KCNA1Q09470 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNA1Q09470 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
KCNA1Q09470 AC112777.1-201ENST00000540175 1423 ntBASIC20.38■□□□□ 0.85
KCNA1Q09470 HOXB1-202ENST00000577092 1414 ntBASIC20.38■□□□□ 0.85
KCNA1Q09470 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA1Q09470 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA1Q09470 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA1Q09470 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.38■□□□□ 0.85
KCNA1Q09470 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA1Q09470 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KCNA1Q09470 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA1Q09470 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.38■□□□□ 0.85
KCNA1Q09470 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNA1Q09470 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA1Q09470 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA1Q09470 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA1Q09470 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA1Q09470 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNA1Q09470 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNA1Q09470 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.38■□□□□ 0.85
KCNA1Q09470 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNA1Q09470 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.38■□□□□ 0.85
KCNA1Q09470 AC024243.1-201ENST00000609234 778 ntBASIC20.38■□□□□ 0.85
KCNA1Q09470 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA1Q09470 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA1Q09470 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms