Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCS1Q01581 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.93■□□□□ 0.46
HMGCS1Q01581 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCS1Q01581 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.93■□□□□ 0.46
HMGCS1Q01581 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
HMGCS1Q01581 HCG11-201ENST00000411553 5696 ntBASIC17.93■□□□□ 0.46
HMGCS1Q01581 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGCS1Q01581 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGCS1Q01581 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HMGCS1Q01581 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCS1Q01581 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HMGCS1Q01581 AC112777.1-201ENST00000540175 1423 ntBASIC17.92■□□□□ 0.46
HMGCS1Q01581 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGCS1Q01581 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCS1Q01581 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
HMGCS1Q01581 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGCS1Q01581 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGCS1Q01581 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGCS1Q01581 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
HMGCS1Q01581 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCS1Q01581 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HMGCS1Q01581 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCS1Q01581 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCS1Q01581 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGCS1Q01581 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCS1Q01581 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGCS1Q01581 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS1Q01581 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS1Q01581 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS1Q01581 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS1Q01581 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS1Q01581 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS1Q01581 KRT8P45-201ENST00000414328 1447 ntBASIC17.91■□□□□ 0.46
HMGCS1Q01581 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS1Q01581 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS1Q01581 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS1Q01581 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS1Q01581 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.91■□□□□ 0.46
HMGCS1Q01581 RPS2P55-201ENST00000397318 883 ntBASIC17.91■□□□□ 0.46
HMGCS1Q01581 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCS1Q01581 AC107956.1-201ENST00000494359 873 ntBASIC17.91■□□□□ 0.46
HMGCS1Q01581 NUDT16P1-203ENST00000513809 620 ntBASIC17.91■□□□□ 0.46
HMGCS1Q01581 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.91■□□□□ 0.46
HMGCS1Q01581 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.91■□□□□ 0.46
HMGCS1Q01581 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCS1Q01581 SLC25A1P4-201ENST00000567977 778 ntBASIC17.91■□□□□ 0.46
HMGCS1Q01581 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCS1Q01581 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.91■□□□□ 0.46
HMGCS1Q01581 AP006294.2-201ENST00000641667 209 ntBASIC17.91■□□□□ 0.46
HMGCS1Q01581 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS1Q01581 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCS1Q01581 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCS1Q01581 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS1Q01581 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS1Q01581 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCS1Q01581 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HMGCS1Q01581 AC096733.2-201ENST00000609937 1394 ntBASIC17.91■□□□□ 0.46
HMGCS1Q01581 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS1Q01581 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS1Q01581 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS1Q01581 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS1Q01581 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS1Q01581 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 MFAP1P1-201ENST00000442257 1255 ntBASIC17.9■□□□□ 0.46
HMGCS1Q01581 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS1Q01581 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS1Q01581 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 AC116562.2-201ENST00000507042 360 ntBASIC17.9■□□□□ 0.46
HMGCS1Q01581 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 AC113410.3-201ENST00000623366 203 ntBASIC17.9■□□□□ 0.46
HMGCS1Q01581 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS1Q01581 MYC-208ENST00000641036 567 ntBASIC17.9■□□□□ 0.46
HMGCS1Q01581 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS1Q01581 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS1Q01581 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HMGCS1Q01581 AL109659.2-201ENST00000606809 1674 ntBASIC17.9■□□□□ 0.46
HMGCS1Q01581 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
HMGCS1Q01581 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMGCS1Q01581 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMGCS1Q01581 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS1Q01581 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms