Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.62■□□□□ 0.41
NR1H2P55055 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.62■□□□□ 0.41
NR1H2P55055 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
NR1H2P55055 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H2P55055 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H2P55055 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.61■□□□□ 0.41
NR1H2P55055 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H2P55055 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NR1H2P55055 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.61■□□□□ 0.41
NR1H2P55055 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.61■□□□□ 0.41
NR1H2P55055 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.61■□□□□ 0.41
NR1H2P55055 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H2P55055 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H2P55055 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H2P55055 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NR1H2P55055 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H2P55055 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NR1H2P55055 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.61■□□□□ 0.41
NR1H2P55055 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.61■□□□□ 0.41
NR1H2P55055 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NR1H2P55055 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H2P55055 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H2P55055 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.61■□□□□ 0.41
NR1H2P55055 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.61■□□□□ 0.41
NR1H2P55055 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.61■□□□□ 0.41
NR1H2P55055 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.61■□□□□ 0.41
NR1H2P55055 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.61■□□□□ 0.41
NR1H2P55055 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H2P55055 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H2P55055 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
NR1H2P55055 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.6■□□□□ 0.41
NR1H2P55055 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NR1H2P55055 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.6■□□□□ 0.41
NR1H2P55055 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.6■□□□□ 0.41
NR1H2P55055 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.6■□□□□ 0.41
NR1H2P55055 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.6■□□□□ 0.41
NR1H2P55055 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.6■□□□□ 0.41
NR1H2P55055 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NR1H2P55055 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.6■□□□□ 0.41
NR1H2P55055 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 KRT8P17-201ENST00000453110 1448 ntBASIC17.6■□□□□ 0.41
NR1H2P55055 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.6■□□□□ 0.41
NR1H2P55055 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.6■□□□□ 0.41
NR1H2P55055 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NR1H2P55055 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NR1H2P55055 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NR1H2P55055 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.6■□□□□ 0.41
NR1H2P55055 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.6■□□□□ 0.41
NR1H2P55055 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.6■□□□□ 0.41
NR1H2P55055 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H2P55055 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.59■□□□□ 0.41
NR1H2P55055 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.59■□□□□ 0.41
NR1H2P55055 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.59■□□□□ 0.41
NR1H2P55055 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.59■□□□□ 0.41
NR1H2P55055 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 AC005829.2-201ENST00000571422 1056 ntBASIC17.59■□□□□ 0.41
NR1H2P55055 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
NR1H2P55055 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.59■□□□□ 0.41
NR1H2P55055 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 AC080080.1-201ENST00000625121 2420 ntBASIC17.59■□□□□ 0.41
NR1H2P55055 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.59■□□□□ 0.41
NR1H2P55055 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H2P55055 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NR1H2P55055 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NR1H2P55055 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.58■□□□□ 0.41
NR1H2P55055 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms