Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
EPHB3P54753 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB3P54753 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB3P54753 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB3P54753 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.4■□□□□ 0.7
EPHB3P54753 DRAXINP1-201ENST00000437611 948 ntBASIC19.4■□□□□ 0.7
EPHB3P54753 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.4■□□□□ 0.7
EPHB3P54753 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.4■□□□□ 0.7
EPHB3P54753 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.4■□□□□ 0.7
EPHB3P54753 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.4■□□□□ 0.7
EPHB3P54753 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.4■□□□□ 0.7
EPHB3P54753 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB3P54753 GPR32P1-201ENST00000601788 811 ntBASIC19.4■□□□□ 0.7
EPHB3P54753 AL390719.2-201ENST00000606993 987 ntBASIC19.4■□□□□ 0.7
EPHB3P54753 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB3P54753 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.4■□□□□ 0.7
EPHB3P54753 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB3P54753 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB3P54753 MTMR9LP-203ENST00000426597 1545 ntBASIC19.4■□□□□ 0.7
EPHB3P54753 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
EPHB3P54753 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB3P54753 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EPHB3P54753 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
EPHB3P54753 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
EPHB3P54753 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.39■□□□□ 0.7
EPHB3P54753 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.39■□□□□ 0.69
EPHB3P54753 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB3P54753 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB3P54753 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.39■□□□□ 0.69
EPHB3P54753 LINC00265-3P-201ENST00000447588 903 ntBASIC19.39■□□□□ 0.69
EPHB3P54753 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.39■□□□□ 0.69
EPHB3P54753 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.39■□□□□ 0.69
EPHB3P54753 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.39■□□□□ 0.69
EPHB3P54753 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.39■□□□□ 0.69
EPHB3P54753 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.39■□□□□ 0.69
EPHB3P54753 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB3P54753 IGHV3-41-201ENST00000613121 348 ntBASIC19.39■□□□□ 0.69
EPHB3P54753 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.39■□□□□ 0.69
EPHB3P54753 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
EPHB3P54753 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB3P54753 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB3P54753 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB3P54753 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.39■□□□□ 0.69
EPHB3P54753 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB3P54753 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.39■□□□□ 0.69
EPHB3P54753 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.39■□□□□ 0.69
EPHB3P54753 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB3P54753 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
EPHB3P54753 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
EPHB3P54753 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB3P54753 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB3P54753 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB3P54753 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB3P54753 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB3P54753 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB3P54753 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
EPHB3P54753 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB3P54753 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB3P54753 NUS1P1-201ENST00000446295 882 ntBASIC19.38■□□□□ 0.69
EPHB3P54753 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.38■□□□□ 0.69
EPHB3P54753 KRT18P41-201ENST00000518924 1277 ntBASIC19.38■□□□□ 0.69
EPHB3P54753 AP000867.3-201ENST00000524675 377 ntBASIC19.38■□□□□ 0.69
EPHB3P54753 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
EPHB3P54753 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB3P54753 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.38■□□□□ 0.69
EPHB3P54753 TPSP2-201ENST00000561760 610 ntBASIC19.38■□□□□ 0.69
EPHB3P54753 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
EPHB3P54753 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.38■□□□□ 0.69
EPHB3P54753 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
EPHB3P54753 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.38■□□□□ 0.69
EPHB3P54753 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.38■□□□□ 0.69
EPHB3P54753 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
EPHB3P54753 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
EPHB3P54753 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB3P54753 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB3P54753 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB3P54753 AL161938.1-201ENST00000569833 2180 ntBASIC19.37■□□□□ 0.69
EPHB3P54753 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.37■□□□□ 0.69
EPHB3P54753 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.37■□□□□ 0.69
EPHB3P54753 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB3P54753 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB3P54753 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.37■□□□□ 0.69
EPHB3P54753 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB3P54753 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.37■□□□□ 0.69
EPHB3P54753 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB3P54753 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB3P54753 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB3P54753 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB3P54753 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB3P54753 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
EPHB3P54753 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB3P54753 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB3P54753 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB3P54753 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB3P54753 IGHGP-201ENST00000390555 1178 ntBASIC19.37■□□□□ 0.69
EPHB3P54753 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
EPHB3P54753 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB3P54753 AC026396.1-201ENST00000419388 421 ntBASIC19.37■□□□□ 0.69
EPHB3P54753 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.37■□□□□ 0.69
EPHB3P54753 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms