Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.46■□□□□ 0.87
PMS1P54277 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.46■□□□□ 0.87
PMS1P54277 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PMS1P54277 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.46■□□□□ 0.87
PMS1P54277 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.46■□□□□ 0.87
PMS1P54277 MYC-208ENST00000641036 567 ntBASIC20.46■□□□□ 0.87
PMS1P54277 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PMS1P54277 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
PMS1P54277 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.46■□□□□ 0.87
PMS1P54277 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.46■□□□□ 0.87
PMS1P54277 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.46■□□□□ 0.87
PMS1P54277 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.45■□□□□ 0.87
PMS1P54277 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS1P54277 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS1P54277 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.45■□□□□ 0.86
PMS1P54277 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.45■□□□□ 0.86
PMS1P54277 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
PMS1P54277 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PMS1P54277 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS1P54277 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS1P54277 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS1P54277 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
PMS1P54277 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.45■□□□□ 0.86
PMS1P54277 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PMS1P54277 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS1P54277 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.45■□□□□ 0.86
PMS1P54277 CA15P1-201ENST00000481698 905 ntBASIC20.45■□□□□ 0.86
PMS1P54277 AP005242.2-201ENST00000580065 1175 ntBASIC20.45■□□□□ 0.86
PMS1P54277 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
PMS1P54277 TMEM191A-211ENST00000637163 1067 ntBASIC20.45■□□□□ 0.86
PMS1P54277 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS1P54277 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PMS1P54277 AC067852.2-201ENST00000590513 2313 ntBASIC20.45■□□□□ 0.86
PMS1P54277 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS1P54277 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.45■□□□□ 0.86
PMS1P54277 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.45■□□□□ 0.86
PMS1P54277 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS1P54277 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS1P54277 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS1P54277 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS1P54277 KRT8P50-201ENST00000562022 1438 ntBASIC20.44■□□□□ 0.86
PMS1P54277 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PMS1P54277 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMS1P54277 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PMS1P54277 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMS1P54277 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMS1P54277 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.44■□□□□ 0.86
PMS1P54277 AL390955.1-201ENST00000428694 934 ntBASIC20.44■□□□□ 0.86
PMS1P54277 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
PMS1P54277 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PMS1P54277 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.44■□□□□ 0.86
PMS1P54277 AL023803.3-201ENST00000615559 522 ntBASIC20.44■□□□□ 0.86
PMS1P54277 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMS1P54277 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PMS1P54277 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.44■□□□□ 0.86
PMS1P54277 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.44■□□□□ 0.86
PMS1P54277 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMS1P54277 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PMS1P54277 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PMS1P54277 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PMS1P54277 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.43■□□□□ 0.86
PMS1P54277 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.43■□□□□ 0.86
PMS1P54277 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PMS1P54277 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.43■□□□□ 0.86
PMS1P54277 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.43■□□□□ 0.86
PMS1P54277 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.43■□□□□ 0.86
PMS1P54277 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 AP000525.1-201ENST00000608286 694 ntBASIC20.43■□□□□ 0.86
PMS1P54277 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.43■□□□□ 0.86
PMS1P54277 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PMS1P54277 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PMS1P54277 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms