Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATN1P54259 AC104109.2-201ENST00000602919 1418 ntBASIC20.44■□□□□ 0.86
ATN1P54259 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
ATN1P54259 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATN1P54259 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ATN1P54259 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.43■□□□□ 0.86
ATN1P54259 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATN1P54259 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATN1P54259 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATN1P54259 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.43■□□□□ 0.86
ATN1P54259 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.43■□□□□ 0.86
ATN1P54259 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.43■□□□□ 0.86
ATN1P54259 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC20.43■□□□□ 0.86
ATN1P54259 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.43■□□□□ 0.86
ATN1P54259 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.43■□□□□ 0.86
ATN1P54259 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATN1P54259 MTDHP3-201ENST00000594186 672 ntBASIC20.43■□□□□ 0.86
ATN1P54259 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATN1P54259 AL355877.3-201ENST00000622820 899 ntBASIC20.43■□□□□ 0.86
ATN1P54259 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATN1P54259 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.43■□□□□ 0.86
ATN1P54259 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.43■□□□□ 0.86
ATN1P54259 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
ATN1P54259 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.43■□□□□ 0.86
ATN1P54259 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.43■□□□□ 0.86
ATN1P54259 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ATN1P54259 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATN1P54259 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.43■□□□□ 0.86
ATN1P54259 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATN1P54259 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATN1P54259 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.42■□□□□ 0.86
ATN1P54259 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
ATN1P54259 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
ATN1P54259 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATN1P54259 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.42■□□□□ 0.86
ATN1P54259 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATN1P54259 LST1-206ENST00000376090 689 ntTSL 2 BASIC20.42■□□□□ 0.86
ATN1P54259 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATN1P54259 LST1-209ENST00000376096 565 ntTSL 2 BASIC20.42■□□□□ 0.86
ATN1P54259 LST1-210ENST00000376099 610 ntTSL 2 BASIC20.42■□□□□ 0.86
ATN1P54259 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATN1P54259 RCN1P2-201ENST00000398357 915 ntBASIC20.42■□□□□ 0.86
ATN1P54259 LST1-214ENST00000418507 726 ntTSL 2 BASIC20.42■□□□□ 0.86
ATN1P54259 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.42■□□□□ 0.86
ATN1P54259 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATN1P54259 FGFR3P6-201ENST00000457012 610 ntBASIC20.42■□□□□ 0.86
ATN1P54259 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.42■□□□□ 0.86
ATN1P54259 AC010327.4-202ENST00000591484 748 ntBASIC20.42■□□□□ 0.86
ATN1P54259 TCF3P1-201ENST00000423021 1937 ntBASIC20.42■□□□□ 0.86
ATN1P54259 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ATN1P54259 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.42■□□□□ 0.86
ATN1P54259 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.42■□□□□ 0.86
ATN1P54259 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.42■□□□□ 0.86
ATN1P54259 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ATN1P54259 KRT8P32-201ENST00000512863 1461 ntBASIC20.42■□□□□ 0.86
ATN1P54259 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATN1P54259 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATN1P54259 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.42■□□□□ 0.86
ATN1P54259 TEX21P-204ENST00000641479 1693 ntBASIC20.42■□□□□ 0.86
ATN1P54259 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATN1P54259 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.41■□□□□ 0.86
ATN1P54259 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
ATN1P54259 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATN1P54259 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATN1P54259 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.41■□□□□ 0.86
ATN1P54259 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.41■□□□□ 0.86
ATN1P54259 PMS2P2-201ENST00000425039 1128 ntBASIC20.41■□□□□ 0.86
ATN1P54259 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.41■□□□□ 0.86
ATN1P54259 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.41■□□□□ 0.86
ATN1P54259 SCARNA2-201ENST00000458748 420 ntBASIC20.41■□□□□ 0.86
ATN1P54259 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ATN1P54259 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.41■□□□□ 0.86
ATN1P54259 AC027796.2-201ENST00000575326 344 ntBASIC20.41■□□□□ 0.86
ATN1P54259 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.41■□□□□ 0.86
ATN1P54259 AL356488.2-201ENST00000602755 427 ntBASIC20.41■□□□□ 0.86
ATN1P54259 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATN1P54259 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATN1P54259 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATN1P54259 GABARAPL3-202ENST00000624044 1851 ntBASIC20.41■□□□□ 0.86
ATN1P54259 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATN1P54259 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATN1P54259 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.41■□□□□ 0.86
ATN1P54259 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.4■□□□□ 0.86
ATN1P54259 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATN1P54259 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATN1P54259 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATN1P54259 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATN1P54259 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATN1P54259 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATN1P54259 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.4■□□□□ 0.86
ATN1P54259 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATN1P54259 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATN1P54259 AC098831.1-202ENST00000438821 336 ntBASIC20.4■□□□□ 0.86
ATN1P54259 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATN1P54259 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.4■□□□□ 0.86
ATN1P54259 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.4■□□□□ 0.86
ATN1P54259 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.4■□□□□ 0.86
ATN1P54259 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATN1P54259 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.4■□□□□ 0.86
ATN1P54259 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms