Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ZNF140P52738 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF140P52738 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF140P52738 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ZNF140P52738 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF140P52738 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF140P52738 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF140P52738 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF140P52738 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.49■□□□□ 0.55
ZNF140P52738 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF140P52738 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF140P52738 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF140P52738 AL163051.1-201ENST00000569214 1512 ntBASIC18.49■□□□□ 0.55
ZNF140P52738 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ZNF140P52738 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF140P52738 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.48■□□□□ 0.55
ZNF140P52738 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF140P52738 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF140P52738 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ZNF140P52738 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.48■□□□□ 0.55
ZNF140P52738 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF140P52738 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ZNF140P52738 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF140P52738 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.48■□□□□ 0.55
ZNF140P52738 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF140P52738 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.48■□□□□ 0.55
ZNF140P52738 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF140P52738 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF140P52738 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF140P52738 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF140P52738 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF140P52738 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF140P52738 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF140P52738 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.48■□□□□ 0.55
ZNF140P52738 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF140P52738 AC010203.1-204ENST00000548782 407 ntBASIC18.48■□□□□ 0.55
ZNF140P52738 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.48■□□□□ 0.55
ZNF140P52738 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.48■□□□□ 0.55
ZNF140P52738 AC104390.1-201ENST00000555663 520 ntBASIC18.48■□□□□ 0.55
ZNF140P52738 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF140P52738 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.48■□□□□ 0.55
ZNF140P52738 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ZNF140P52738 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ZNF140P52738 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ZNF140P52738 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ZNF140P52738 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF140P52738 RNF165-205ENST00000588679 2904 ntBASIC18.48■□□□□ 0.55
ZNF140P52738 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ZNF140P52738 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF140P52738 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ZNF140P52738 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF140P52738 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.47■□□□□ 0.55
ZNF140P52738 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF140P52738 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ZNF140P52738 AC113347.1-201ENST00000413321 391 ntBASIC18.47■□□□□ 0.55
ZNF140P52738 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ZNF140P52738 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 SEC1P-202ENST00000473944 940 ntBASIC18.47■□□□□ 0.55
ZNF140P52738 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF140P52738 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.47■□□□□ 0.55
ZNF140P52738 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.47■□□□□ 0.55
ZNF140P52738 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF140P52738 AC141257.4-201ENST00000634557 245 ntBASIC18.47■□□□□ 0.55
ZNF140P52738 AC136944.6-201ENST00000634818 245 ntBASIC18.47■□□□□ 0.55
ZNF140P52738 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF140P52738 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF140P52738 BICD1-207ENST00000551848 1962 ntBASIC18.47■□□□□ 0.55
ZNF140P52738 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ZNF140P52738 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ZNF140P52738 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF140P52738 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF140P52738 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF140P52738 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF140P52738 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
ZNF140P52738 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ZNF140P52738 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF140P52738 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF140P52738 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF140P52738 AC211429.1-201ENST00000415277 523 ntBASIC18.46■□□□□ 0.55
ZNF140P52738 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
ZNF140P52738 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.46■□□□□ 0.55
ZNF140P52738 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF140P52738 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ZNF140P52738 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
ZNF140P52738 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms