Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1DP48730 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.61■□□□□ 0.57
CSNK1DP48730 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.61■□□□□ 0.57
CSNK1DP48730 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1DP48730 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1DP48730 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1DP48730 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1DP48730 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CSNK1DP48730 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1DP48730 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1DP48730 AC073592.3-201ENST00000625118 1834 ntBASIC18.6■□□□□ 0.57
CSNK1DP48730 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CSNK1DP48730 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1DP48730 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1DP48730 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.6■□□□□ 0.57
CSNK1DP48730 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.6■□□□□ 0.57
CSNK1DP48730 AC093503.3-201ENST00000624917 2352 ntBASIC18.6■□□□□ 0.57
CSNK1DP48730 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CSNK1DP48730 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CSNK1DP48730 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1DP48730 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1DP48730 ARMC10P1-201ENST00000313754 855 ntBASIC18.6■□□□□ 0.57
CSNK1DP48730 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1DP48730 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1DP48730 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.6■□□□□ 0.57
CSNK1DP48730 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.6■□□□□ 0.57
CSNK1DP48730 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.6■□□□□ 0.57
CSNK1DP48730 AL136038.3-201ENST00000561909 1096 ntBASIC18.6■□□□□ 0.57
CSNK1DP48730 AC087388.1-201ENST00000571370 1112 ntBASIC18.6■□□□□ 0.57
CSNK1DP48730 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.6■□□□□ 0.57
CSNK1DP48730 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1DP48730 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1DP48730 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1DP48730 SDHAP2-201ENST00000455183 2001 ntBASIC18.59■□□□□ 0.57
CSNK1DP48730 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1DP48730 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CSNK1DP48730 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.59■□□□□ 0.57
CSNK1DP48730 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CSNK1DP48730 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.59■□□□□ 0.57
CSNK1DP48730 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.59■□□□□ 0.57
CSNK1DP48730 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.59■□□□□ 0.57
CSNK1DP48730 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CSNK1DP48730 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1DP48730 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1DP48730 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1DP48730 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.59■□□□□ 0.57
CSNK1DP48730 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
CSNK1DP48730 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.59■□□□□ 0.57
CSNK1DP48730 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1DP48730 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.59■□□□□ 0.57
CSNK1DP48730 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CSNK1DP48730 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.59■□□□□ 0.57
CSNK1DP48730 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1DP48730 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.58■□□□□ 0.57
CSNK1DP48730 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1DP48730 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.58■□□□□ 0.57
CSNK1DP48730 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1DP48730 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1DP48730 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1DP48730 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1DP48730 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1DP48730 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1DP48730 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CSNK1DP48730 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1DP48730 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1DP48730 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CSNK1DP48730 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1DP48730 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1DP48730 MIR662-201ENST00000384847 95 ntBASIC18.58■□□□□ 0.56
CSNK1DP48730 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1DP48730 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.58■□□□□ 0.56
CSNK1DP48730 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.58■□□□□ 0.56
CSNK1DP48730 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
CSNK1DP48730 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.58■□□□□ 0.56
CSNK1DP48730 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.58■□□□□ 0.56
CSNK1DP48730 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1DP48730 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1DP48730 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1DP48730 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CSNK1DP48730 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1DP48730 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1DP48730 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.58■□□□□ 0.56
CSNK1DP48730 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1DP48730 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.58■□□□□ 0.56
CSNK1DP48730 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CSNK1DP48730 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1DP48730 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1DP48730 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1DP48730 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1DP48730 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1DP48730 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1DP48730 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.57■□□□□ 0.56
CSNK1DP48730 SPDYE13P-201ENST00000445314 798 ntBASIC18.57■□□□□ 0.56
CSNK1DP48730 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1DP48730 FAM86EP-206ENST00000510506 987 ntBASIC18.57■□□□□ 0.56
CSNK1DP48730 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CSNK1DP48730 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
CSNK1DP48730 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CSNK1DP48730 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1DP48730 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms