Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.23■□□□□ 0.83
USP8P40818 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP8P40818 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.23■□□□□ 0.83
USP8P40818 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP8P40818 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP8P40818 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP8P40818 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP8P40818 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
USP8P40818 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.23■□□□□ 0.83
USP8P40818 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP8P40818 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.23■□□□□ 0.83
USP8P40818 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.23■□□□□ 0.83
USP8P40818 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.23■□□□□ 0.83
USP8P40818 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.23■□□□□ 0.83
USP8P40818 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.23■□□□□ 0.83
USP8P40818 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.23■□□□□ 0.83
USP8P40818 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
USP8P40818 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
USP8P40818 AP000692.2-201ENST00000608391 879 ntBASIC20.23■□□□□ 0.83
USP8P40818 AC093525.10-201ENST00000625130 1569 ntBASIC20.23■□□□□ 0.83
USP8P40818 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP8P40818 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP8P40818 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.23■□□□□ 0.83
USP8P40818 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP8P40818 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
USP8P40818 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
USP8P40818 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP8P40818 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.22■□□□□ 0.83
USP8P40818 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP8P40818 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
USP8P40818 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
USP8P40818 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
USP8P40818 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.22■□□□□ 0.83
USP8P40818 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP8P40818 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP8P40818 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP8P40818 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.22■□□□□ 0.83
USP8P40818 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.22■□□□□ 0.83
USP8P40818 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP8P40818 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP8P40818 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.22■□□□□ 0.83
USP8P40818 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.22■□□□□ 0.83
USP8P40818 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.22■□□□□ 0.83
USP8P40818 AC026471.5-201ENST00000615068 467 ntBASIC20.22■□□□□ 0.83
USP8P40818 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.22■□□□□ 0.83
USP8P40818 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
USP8P40818 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.22■□□□□ 0.83
USP8P40818 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.22■□□□□ 0.83
USP8P40818 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
USP8P40818 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP8P40818 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP8P40818 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP8P40818 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.22■□□□□ 0.83
USP8P40818 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP8P40818 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
USP8P40818 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP8P40818 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP8P40818 ANO7L1-203ENST00000602586 1720 ntBASIC20.22■□□□□ 0.83
USP8P40818 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
USP8P40818 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP8P40818 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.21■□□□□ 0.83
USP8P40818 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP8P40818 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP8P40818 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
USP8P40818 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP8P40818 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.21■□□□□ 0.83
USP8P40818 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP8P40818 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
USP8P40818 MIR718-201ENST00000390190 70 ntBASIC20.21■□□□□ 0.83
USP8P40818 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.21■□□□□ 0.83
USP8P40818 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.21■□□□□ 0.83
USP8P40818 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP8P40818 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.21■□□□□ 0.83
USP8P40818 AC116562.2-201ENST00000507042 360 ntBASIC20.21■□□□□ 0.83
USP8P40818 AC097488.1-201ENST00000507834 756 ntBASIC20.21■□□□□ 0.83
USP8P40818 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.21■□□□□ 0.83
USP8P40818 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.21■□□□□ 0.83
USP8P40818 REXO1L10P-201ENST00000615707 1290 ntBASIC20.21■□□□□ 0.83
USP8P40818 REXO1L12P-201ENST00000622156 912 ntBASIC20.21■□□□□ 0.83
USP8P40818 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
USP8P40818 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.21■□□□□ 0.83
USP8P40818 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.21■□□□□ 0.83
USP8P40818 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP8P40818 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.21■□□□□ 0.83
USP8P40818 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.21■□□□□ 0.83
USP8P40818 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
USP8P40818 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
USP8P40818 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
USP8P40818 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
USP8P40818 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
USP8P40818 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
USP8P40818 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP8P40818 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP8P40818 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP8P40818 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.2■□□□□ 0.82
USP8P40818 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP8P40818 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP8P40818 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP8P40818 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
USP8P40818 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms