Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 NOC2LP2-201ENST00000407594 1944 ntBASIC17.68■□□□□ 0.42
KRT20P35900 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT20P35900 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT20P35900 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
KRT20P35900 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
KRT20P35900 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.68■□□□□ 0.42
KRT20P35900 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.68■□□□□ 0.42
KRT20P35900 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.68■□□□□ 0.42
KRT20P35900 AC093525.10-201ENST00000625130 1569 ntBASIC17.68■□□□□ 0.42
KRT20P35900 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
KRT20P35900 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT20P35900 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT20P35900 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
KRT20P35900 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT20P35900 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT20P35900 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT20P35900 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT20P35900 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT20P35900 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
KRT20P35900 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
KRT20P35900 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
KRT20P35900 AP000997.3-201ENST00000623333 2250 ntBASIC17.67■□□□□ 0.42
KRT20P35900 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT20P35900 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.67■□□□□ 0.42
KRT20P35900 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT20P35900 TSPY7P-201ENST00000431358 1114 ntBASIC17.67■□□□□ 0.42
KRT20P35900 FAM207BP-201ENST00000447172 505 ntBASIC17.67■□□□□ 0.42
KRT20P35900 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 B3GAT3P1-201ENST00000471720 806 ntBASIC17.67■□□□□ 0.42
KRT20P35900 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.67■□□□□ 0.42
KRT20P35900 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
KRT20P35900 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT20P35900 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT20P35900 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
KRT20P35900 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT20P35900 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT20P35900 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT20P35900 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT20P35900 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT20P35900 Z98044.1-201ENST00000632503 1764 ntBASIC17.66■□□□□ 0.42
KRT20P35900 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT20P35900 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT20P35900 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT20P35900 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT20P35900 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT20P35900 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT20P35900 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
KRT20P35900 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT20P35900 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT20P35900 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
KRT20P35900 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT20P35900 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT20P35900 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.66■□□□□ 0.42
KRT20P35900 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT20P35900 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT20P35900 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT20P35900 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.66■□□□□ 0.42
KRT20P35900 AP003071.4-201ENST00000562276 1284 ntBASIC17.66■□□□□ 0.42
KRT20P35900 MIR4497-201ENST00000583208 89 ntBASIC17.66■□□□□ 0.42
KRT20P35900 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT20P35900 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT20P35900 KRT8P41-201ENST00000533985 1514 ntBASIC17.66■□□□□ 0.42
KRT20P35900 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
KRT20P35900 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KRT20P35900 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms