Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CLCN1P35523 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CLCN1P35523 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CLCN1P35523 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.14■□□□□ 0.98
CLCN1P35523 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.14■□□□□ 0.98
CLCN1P35523 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN1P35523 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN1P35523 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.14■□□□□ 0.97
CLCN1P35523 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN1P35523 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.14■□□□□ 0.97
CLCN1P35523 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CLCN1P35523 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.14■□□□□ 0.97
CLCN1P35523 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN1P35523 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN1P35523 AC006557.6-201ENST00000623071 864 ntBASIC21.14■□□□□ 0.97
CLCN1P35523 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.14■□□□□ 0.97
CLCN1P35523 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CLCN1P35523 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN1P35523 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CLCN1P35523 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN1P35523 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.13■□□□□ 0.97
CLCN1P35523 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.13■□□□□ 0.97
CLCN1P35523 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
CLCN1P35523 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN1P35523 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.13■□□□□ 0.97
CLCN1P35523 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CLCN1P35523 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
CLCN1P35523 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN1P35523 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.13■□□□□ 0.97
CLCN1P35523 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.13■□□□□ 0.97
CLCN1P35523 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN1P35523 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN1P35523 AC069152.1-201ENST00000438030 544 ntBASIC21.13■□□□□ 0.97
CLCN1P35523 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CLCN1P35523 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN1P35523 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN1P35523 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.13■□□□□ 0.97
CLCN1P35523 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC21.13■□□□□ 0.97
CLCN1P35523 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN1P35523 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CLCN1P35523 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN1P35523 AC018553.1-201ENST00000616682 1458 ntBASIC21.13■□□□□ 0.97
CLCN1P35523 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN1P35523 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN1P35523 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN1P35523 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.13■□□□□ 0.97
CLCN1P35523 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN1P35523 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN1P35523 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN1P35523 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CLCN1P35523 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.12■□□□□ 0.97
CLCN1P35523 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CLCN1P35523 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC21.12■□□□□ 0.97
CLCN1P35523 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CLCN1P35523 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN1P35523 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CLCN1P35523 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN1P35523 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.12■□□□□ 0.97
CLCN1P35523 AL390719.1-204ENST00000412397 1219 ntBASIC21.12■□□□□ 0.97
CLCN1P35523 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.12■□□□□ 0.97
CLCN1P35523 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.12■□□□□ 0.97
CLCN1P35523 HLA-B-256ENST00000639848 1089 ntBASIC21.12■□□□□ 0.97
CLCN1P35523 AC133041.1-202ENST00000642053 222 ntBASIC21.12■□□□□ 0.97
CLCN1P35523 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN1P35523 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN1P35523 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CLCN1P35523 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.12■□□□□ 0.97
CLCN1P35523 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN1P35523 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CLCN1P35523 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN1P35523 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN1P35523 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN1P35523 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN1P35523 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN1P35523 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.12■□□□□ 0.97
CLCN1P35523 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN1P35523 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CLCN1P35523 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 UBALD1-205ENST00000590891 2641 ntBASIC21.11■□□□□ 0.97
CLCN1P35523 LINC01126-201ENST00000623515 1646 ntBASIC21.11■□□□□ 0.97
CLCN1P35523 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
CLCN1P35523 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.11■□□□□ 0.97
CLCN1P35523 AC116351.2-201ENST00000606540 1585 ntBASIC21.11■□□□□ 0.97
CLCN1P35523 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.11■□□□□ 0.97
CLCN1P35523 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.11■□□□□ 0.97
CLCN1P35523 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.11■□□□□ 0.97
CLCN1P35523 HLA-L-209ENST00000420110 1011 ntBASIC21.11■□□□□ 0.97
CLCN1P35523 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.11■□□□□ 0.97
CLCN1P35523 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.11■□□□□ 0.97
CLCN1P35523 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms