Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 COX20P2-201ENST00000452636 358 ntBASIC26.19■■□□□ 1.78
CPS1P31327 AC021087.4-201ENST00000563761 564 ntBASIC26.19■■□□□ 1.78
CPS1P31327 MIR3180-4-201ENST00000582223 153 ntBASIC26.19■■□□□ 1.78
CPS1P31327 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CPS1P31327 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CPS1P31327 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC26.19■■□□□ 1.78
CPS1P31327 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CPS1P31327 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC26.18■■□□□ 1.78
CPS1P31327 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CPS1P31327 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC26.18■■□□□ 1.78
CPS1P31327 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC26.18■■□□□ 1.78
CPS1P31327 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CPS1P31327 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC26.18■■□□□ 1.78
CPS1P31327 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CPS1P31327 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CPS1P31327 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CPS1P31327 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC26.18■■□□□ 1.78
CPS1P31327 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CPS1P31327 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC26.18■■□□□ 1.78
CPS1P31327 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC26.18■■□□□ 1.78
CPS1P31327 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC26.18■■□□□ 1.78
CPS1P31327 LHX6-205ENST00000464484 666 ntTSL 2 BASIC26.18■■□□□ 1.78
CPS1P31327 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CPS1P31327 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC26.18■■□□□ 1.78
CPS1P31327 AC012640.2-201ENST00000561606 901 ntBASIC26.18■■□□□ 1.78
CPS1P31327 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC26.18■■□□□ 1.78
CPS1P31327 AC011467.4-201ENST00000594891 528 ntBASIC26.18■■□□□ 1.78
CPS1P31327 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC26.18■■□□□ 1.78
CPS1P31327 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CPS1P31327 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC26.17■■□□□ 1.78
CPS1P31327 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CPS1P31327 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
CPS1P31327 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC26.17■■□□□ 1.78
CPS1P31327 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC26.17■■□□□ 1.78
CPS1P31327 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CPS1P31327 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CPS1P31327 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
CPS1P31327 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CPS1P31327 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPS1P31327 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
CPS1P31327 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPS1P31327 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC26.16■■□□□ 1.78
CPS1P31327 RPS2P1-201ENST00000434010 821 ntBASIC26.16■■□□□ 1.78
CPS1P31327 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC26.16■■□□□ 1.78
CPS1P31327 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
CPS1P31327 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC26.16■■□□□ 1.78
CPS1P31327 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC26.16■■□□□ 1.78
CPS1P31327 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CPS1P31327 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC26.16■■□□□ 1.78
CPS1P31327 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPS1P31327 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CPS1P31327 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPS1P31327 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPS1P31327 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC26.16■■□□□ 1.78
CPS1P31327 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC26.16■■□□□ 1.78
CPS1P31327 KRT8P32-201ENST00000512863 1461 ntBASIC26.15■■□□□ 1.78
CPS1P31327 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC26.15■■□□□ 1.78
CPS1P31327 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CPS1P31327 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CPS1P31327 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
CPS1P31327 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPS1P31327 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPS1P31327 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC26.15■■□□□ 1.78
CPS1P31327 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPS1P31327 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC26.15■■□□□ 1.78
CPS1P31327 SPCS2P1-201ENST00000561636 679 ntBASIC26.15■■□□□ 1.78
CPS1P31327 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC26.15■■□□□ 1.78
CPS1P31327 MTDHP5-201ENST00000598980 586 ntBASIC26.15■■□□□ 1.78
CPS1P31327 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPS1P31327 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPS1P31327 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC26.15■■□□□ 1.78
CPS1P31327 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC26.15■■□□□ 1.78
CPS1P31327 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC26.15■■□□□ 1.78
CPS1P31327 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPS1P31327 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CPS1P31327 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CPS1P31327 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CPS1P31327 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPS1P31327 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPS1P31327 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CPS1P31327 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC26.14■■□□□ 1.78
CPS1P31327 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC26.14■■□□□ 1.78
CPS1P31327 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC26.14■■□□□ 1.78
CPS1P31327 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC26.14■■□□□ 1.78
CPS1P31327 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC26.14■■□□□ 1.78
CPS1P31327 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC26.14■■□□□ 1.78
CPS1P31327 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.78
CPS1P31327 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC26.14■■□□□ 1.78
CPS1P31327 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC26.14■■□□□ 1.78
CPS1P31327 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC26.14■■□□□ 1.78
CPS1P31327 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
CPS1P31327 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CPS1P31327 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
CPS1P31327 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
CPS1P31327 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CPS1P31327 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
CPS1P31327 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC26.14■■□□□ 1.77
CPS1P31327 HLA-J-202ENST00000469281 1241 ntBASIC26.14■■□□□ 1.77
CPS1P31327 YBX1P5-201ENST00000509441 847 ntBASIC26.14■■□□□ 1.77
CPS1P31327 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC26.14■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms