Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD40P25942 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.02■□□□□ 0.15
CD40P25942 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.02■□□□□ 0.15
CD40P25942 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD40P25942 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD40P25942 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CD40P25942 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD40P25942 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.01■□□□□ 0.15
CD40P25942 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CD40P25942 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CD40P25942 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.01■□□□□ 0.15
CD40P25942 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.01■□□□□ 0.15
CD40P25942 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.01■□□□□ 0.15
CD40P25942 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.01■□□□□ 0.15
CD40P25942 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.01■□□□□ 0.15
CD40P25942 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.01■□□□□ 0.15
CD40P25942 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.01■□□□□ 0.15
CD40P25942 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.01■□□□□ 0.15
CD40P25942 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.01■□□□□ 0.15
CD40P25942 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CD40P25942 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.01■□□□□ 0.15
CD40P25942 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.01■□□□□ 0.15
CD40P25942 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.01■□□□□ 0.15
CD40P25942 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD40P25942 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16■□□□□ 0.15
CD40P25942 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD40P25942 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CD40P25942 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CD40P25942 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD40P25942 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD40P25942 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD40P25942 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD40P25942 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD40P25942 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD40P25942 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD40P25942 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD40P25942 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD40P25942 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD40P25942 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16■□□□□ 0.15
CD40P25942 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16■□□□□ 0.15
CD40P25942 AP000593.1-201ENST00000393668 712 ntBASIC16■□□□□ 0.15
CD40P25942 PVRIG2P-201ENST00000435460 978 ntBASIC16■□□□□ 0.15
CD40P25942 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16■□□□□ 0.15
CD40P25942 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16■□□□□ 0.15
CD40P25942 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16■□□□□ 0.15
CD40P25942 KRT18P41-201ENST00000518924 1277 ntBASIC16■□□□□ 0.15
CD40P25942 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16■□□□□ 0.15
CD40P25942 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16■□□□□ 0.15
CD40P25942 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD40P25942 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CD40P25942 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16■□□□□ 0.15
CD40P25942 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD40P25942 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16■□□□□ 0.15
CD40P25942 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16■□□□□ 0.15
CD40P25942 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CD40P25942 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16■□□□□ 0.15
CD40P25942 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CD40P25942 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.99■□□□□ 0.15
CD40P25942 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CD40P25942 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CD40P25942 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CD40P25942 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.99■□□□□ 0.15
CD40P25942 MIR662-201ENST00000384847 95 ntBASIC15.99■□□□□ 0.15
CD40P25942 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CD40P25942 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
CD40P25942 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
CD40P25942 AC011498.5-201ENST00000592027 486 ntBASIC15.99■□□□□ 0.15
CD40P25942 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.99■□□□□ 0.15
CD40P25942 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.99■□□□□ 0.15
CD40P25942 KRT8P50-201ENST00000562022 1438 ntBASIC15.99■□□□□ 0.15
CD40P25942 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 AL162741.1-201ENST00000565563 1558 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms