Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH3P22223 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDH3P22223 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CDH3P22223 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDH3P22223 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDH3P22223 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDH3P22223 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH3P22223 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDH3P22223 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH3P22223 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDH3P22223 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH3P22223 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.18■□□□□ 0.5
CDH3P22223 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDH3P22223 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDH3P22223 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CDH3P22223 COX11P1-201ENST00000489116 835 ntBASIC18.18■□□□□ 0.5
CDH3P22223 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.18■□□□□ 0.5
CDH3P22223 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH3P22223 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDH3P22223 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDH3P22223 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH3P22223 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH3P22223 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH3P22223 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH3P22223 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH3P22223 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH3P22223 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH3P22223 AC093484.2-201ENST00000580996 2166 ntBASIC18.17■□□□□ 0.5
CDH3P22223 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.17■□□□□ 0.5
CDH3P22223 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDH3P22223 AL133373.2-201ENST00000623187 2828 ntBASIC18.17■□□□□ 0.5
CDH3P22223 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.17■□□□□ 0.5
CDH3P22223 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH3P22223 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH3P22223 AC117947.1-201ENST00000427448 529 ntBASIC18.17■□□□□ 0.5
CDH3P22223 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH3P22223 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH3P22223 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.17■□□□□ 0.5
CDH3P22223 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH3P22223 AC139887.4-201ENST00000607877 719 ntBASIC18.17■□□□□ 0.5
CDH3P22223 AC008622.2-201ENST00000617006 1229 ntBASIC18.17■□□□□ 0.5
CDH3P22223 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH3P22223 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CDH3P22223 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH3P22223 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH3P22223 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDH3P22223 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH3P22223 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH3P22223 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CDH3P22223 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CDH3P22223 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH3P22223 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH3P22223 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH3P22223 AC141586.3-201ENST00000562166 1838 ntBASIC18.16■□□□□ 0.5
CDH3P22223 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH3P22223 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH3P22223 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH3P22223 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH3P22223 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH3P22223 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.16■□□□□ 0.5
CDH3P22223 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.16■□□□□ 0.5
CDH3P22223 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 MIR4674-201ENST00000582457 87 ntBASIC18.16■□□□□ 0.5
CDH3P22223 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH3P22223 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.16■□□□□ 0.5
CDH3P22223 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CDH3P22223 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH3P22223 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms